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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003960000
- symbol?: —
- synonym:
- description?: DUF1672 domain-containing protein
- DUF1672 domain-containing protein
- lipoprotein
- putative lipoprotein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4271557..4272780
- synteny block?: BlockID0030060
- occurrence?: in 53% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1447
08BA02176:
—
11819-97:
MS7_1441
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
SAAV_1480
HO 5096 0412:
—
JH1:
SaurJH1_1578
JH9:
SaurJH9_1547
JKD6008:
SAA6008_01457
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_1478
Mu50:
SAV1490
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_01580 (lpl7nm)
TCH60:
—
TW20:
SATW20_14850
USA300_TCH1516:
USA300HOU_1427
VC40:
SAVC_06685
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
COL --------------------MNNESKKD----TNTETNTETKSVPEEMEASKYVGQGFQP
N315 --------------------MENESSKD--------TNTETKSVPEEMEASKYVGQGFQP
NCTC8325 --------------------MNNESKKDTNTETNTETNTETKSVPEEMEASKYVGQGFQP
Newman --------------------MNNESKKD----TNTETNTETKSVPEEMEASKYVGQGFQP
USA300_FPR3757 --------------------MNNESKKD----TNTETNTETKSVPEEMEASKYVGQGFQP
JSNZ MFKKAKLILIATLLLSGCSAMNNESKKDTNTDTNTETNTEIKSVPEEMEASKYVGQGFQP
*:***.** **** *******************
COL PAEKDAIEFVKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNA
N315 PAEKDAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNA
NCTC8325 PAEKDAIEFVKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNA
Newman PAEKDAIEFVKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNA
USA300_FPR3757 PAEKDAIEFVKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCEDHGIVFNA
JSNZ PAEKDAIEFAKKHRKEFEKVGEQFFKDNFGLKVKATNVVGKDDGVEVYVHCDDHGIVFNA
*********.*****************************************:********
COL SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFLKENEKQYQY
N315 SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFFKENEKKYQY
NCTC8325 SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFLKENEKQYQY
Newman SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFLKENEKQYQY
USA300_FPR3757 SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFLKENEKQYQY
JSNZ SLPLYKDAIHQKGSMRSNDNGDDMSMMVGTVLSGFEYRAQKEKYDNLYKFFKENEKKYQY
**************************************************:*****:***
COL TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELN
N315 TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELD
NCTC8325 TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELN
Newman TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELN
USA300_FPR3757 TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELN
JSNZ TGFTKEAINKTQNVGYQNEYFYITYLSRNLKEYRKYYEPLIHKNDKEFKEGMQRARKELN
***********************************************************:
COL YTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
N315 YTANSNTVATLFSTNDKKNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
NCTC8325 YTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
Newman YTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
USA300_FPR3757 YTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
JSNZ YTANTNTVATLFSTNDERNRKEKINNVIDLSEKIERTKDMPIKNTITTQLGNKLIGTKKA
****:***********::******************************************
COL RFDDKKVVSFGAFEDE
N315 RFDDKKVVSFGAFEDE
NCTC8325 RFDDKKVVSFGAFEDE
Newman RFDDKKVVSFGAFEDE
USA300_FPR3757 RFDDKKVVSFGAFEDE
JSNZ RFDDKKVVSFGAFEDE
****************