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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003934000
- symbol?: hup
- synonym:
- description?: DNA-binding protein HU
- DNA-binding protein HU
- DNA-binding protein II
- DNA-binding protein HBsu
- DNA-binding protein HU 1 (DNA-binding protein II) (HB)
- DNA-binding protein II HBsu
- histone family protein DNA-binding protein
- histone family protein DNA-binding protein HU
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4252465..4252737
- synteny block?: BlockID0029800
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1429 (hu)
08BA02176:
C248_1512 (hup)
11819-97:
MS7_1427 (hup)
6850:
RSAU_001343 (hup)
71193:
ST398NM01_1471
ECT-R 2:
ECTR2_1325
ED133:
SAOV_1479 (hup)
ED98:
SAAV_1460 (hup)
HO 5096 0412:
SAEMRSA15_13330 (hup)
JH1:
SaurJH1_1560
JH9:
SaurJH9_1530
JKD6008:
SAA6008_01441
JKD6159:
SAA6159_01337
LGA251:
SARLGA251_13850 (hup)
M013:
M013TW_1420
MRSA252:
SAR1482 (hup)
MSHR1132:
SAMSHR1132_13120
MSSA476:
SAS1414
Mu3:
SAHV_1461 (hu)
Mu50:
SAV1473 (hu)
MW2:
MW1362 (hu)
RF122:
SAB1335c (hup)
ST398:
SAPIG1471
T0131:
SAT0131_01561 (set8nm)
TCH60:
HMPREF0772_11733 (hup)
TW20:
SATW20_14700 (hup)
USA300_TCH1516:
USA300HOU_1410 (hu)
VC40:
SAVC_06615
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
N315 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
NCTC8325 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
Newman MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
USA300_FPR3757 MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNFEVRERAARKG
************************************************************
COL RNPQTGKEIDIPASKVPAFKAGKALKDAVK
N315 RNPQTGKEIDIPASKVPAFKAGKALKDAVK
NCTC8325 RNPQTGKEIDIPASKVPAFKAGKALKDAVK
Newman RNPQTGKEIDIPASKVPAFKAGKALKDAVK
USA300_FPR3757 RNPQTGKEIDIPASKVPAFKAGKALKDAVK
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