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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000006000
- symbol?: dnaA
- synonym:
- description?: chromosomal replication initiator protein DnaA
- chromosomal replication initiator protein DnaA
- chromosomal replication initiation protein
- chromosomal replicator initiator protein
- chromosome replication initiator DnaA
- ATPase DnaA
- DNA-directed DNA replication initiator protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5605..6966
- synteny block?: BlockID0000030
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0001 (dnaA)
08BA02176:
C248_0001 (dnaA)
11819-97:
MS7_0001 (dnaA)
6850:
RSAU_000001 (dnaA)
71193:
ST398NM01_0001
ECT-R 2:
ECTR2_1 (dnaA)
ED133:
SAOV_0001 (dnaA)
ED98:
SAAV_0001 (dnaA)
HO 5096 0412:
SAEMRSA15_00010 (dnaA)
JH1:
SaurJH1_0001 (dnaA)
JH9:
SaurJH9_0001 (dnaA)
JKD6008:
SAA6008_00001 (dnaA)
JKD6159:
SAA6159_00001 (dnaA)
LGA251:
SARLGA251_00010 (dnaA)
M013:
M013TW_0001
MRSA252:
SAR0001 (dnaA)
MSHR1132:
SAMSHR1132_00010
MSSA476:
SAS0001 (dnaA)
Mu3:
SAHV_0001 (dnaA)
Mu50:
SAV0001 (dnaA)
MW2:
MW0001 (dnaA)
RF122:
SAB0001 (dnaA)
ST398:
SAPIG0001 (dnaA)
T0131:
SAT0131_00001 (asnC)
TCH60:
HMPREF0772_10467 (dnaA)
TW20:
SATW20_00010 (dnaA)
USA300_TCH1516:
USA300HOU_0001 (dnaA)
VC40:
SAVC_00005 (dnaA)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEI
N315 MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEI
NCTC8325 MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEI
Newman MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEI
USA300_FPR3757 MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNANWLNQQYAEI
************************************************************
COL IQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHN
N315 IQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHN
NCTC8325 IQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHN
Newman IQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHN
USA300_FPR3757 IQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKPSTETTEDNHVLGREQFNAHN
************************************************************
COL TFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDA
N315 TFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDA
NCTC8325 TFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDA
Newman TFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDA
USA300_FPR3757 TFDTFVIGPGNRFPHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLMHAIGHHVLDNNPDA
************************************************************
COL KVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNE
N315 KVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNE
NCTC8325 KVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNE
Newman KVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNE
USA300_FPR3757 KVIYTSSEKFTNEFIKSIRDNEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNE
************************************************************
COL LHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
N315 LHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
NCTC8325 LHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
Newman LHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
USA300_FPR3757 LHQNNKQIVISSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
************************************************************
COL IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKIT
N315 IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKIT
NCTC8325 IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKIT
Newman IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKIT
USA300_FPR3757 IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDIIQAPKSKKIT
************************************************************
COL IQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHT
N315 IQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHT
NCTC8325 IQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHT
Newman IQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHT
USA300_FPR3757 IQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSRELTDFSLPKIGEEFGGRDHT
************************************************************
COL TVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
N315 TVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
NCTC8325 TVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
Newman TVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
USA300_FPR3757 TVIHAHEKISKDLKEDPIFKQEVENLEKEIRNV
*********************************