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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003916000
- symbol?: birA
- synonym:
- description?: bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor
- bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor
- birA bifunctional protein
- bifunctional biotin operon-related protein / biotin-acetyl-CoA-carboxylase, putative
- bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase BirA
- biotin--[acetyl-CoA-carboxylase] ligase
- biotin--[acetyl-CoA-carboxylase]synthetase
- BirA bifunctional protein [includes: biotinoperon repressor
- Biotin-protein ligase / Biotin operon repressor
- bifunctional biotin-(acetyl-CoA carboxylase) ligase / biotin operon repressor
- bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon transcriptional regulator
- bifunctional biotin operon-related protein and biotin-acetyl-CoA-carboxylase
- biotin--acetyl-CoA-carboxylase ligase
- biotin ligase
- BirA bifunctional biotin operon repressor/biotin--[acetyl-CoA-carboxylase] synthetase
- BirA bifunctional protein [includes: biotin operon repressor]
- BirA family transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4236746..4237717
- synteny block?: BlockID0029620
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1412
08BA02176:
C248_1496 (birA)
11819-97:
MS7_1412
6850:
RSAU_001328 (birA)
71193:
ST398NM01_1456
ECT-R 2:
ECTR2_1310
ED133:
SAOV_1464 (birA)
ED98:
SAAV_1443 (birA)
HO 5096 0412:
SAEMRSA15_13170 (birA)
JH1:
SaurJH1_1544
JH9:
SaurJH9_1515
JKD6008:
SAA6008_01425 (birA)
JKD6159:
SAA6159_01321 (birA)
LGA251:
SARLGA251_13700 (birA)
M013:
M013TW_1404
MRSA252:
SAR1467 (birA)
MSHR1132:
SAMSHR1132_12960
MSSA476:
SAS1399
Mu3:
SAHV_1444
Mu50:
SAV1456
MW2:
MW1346
RF122:
SAB1320c (birA)
ST398:
SAPIG1456
T0131:
SAT0131_01545
TCH60:
HMPREF0772_11748 (birA)
TW20:
SATW20_14550 (birA)
USA300_TCH1516:
USA300HOU_1394 (birA)
VC40:
SAVC_06535
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLL
N315 MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLL
NCTC8325 MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLL
Newman MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLL
USA300_FPR3757 MSKYSQDVLQLLYKNKPNYISGQSIAESLNISRTAVKKVIDQLKLEGCKIDSVNHKGHLL
************************************************************
COL QQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGR
N315 QQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGR
NCTC8325 QQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGR
Newman QQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGR
USA300_FPR3757 QQLPDIWYQGIIDQYTKSSALFDFSEVYDSIDSTQLAAKKSLVGNQSSFFILSDEQTKGR
************************************************************
COL GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPND
N315 GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPND
NCTC8325 GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPND
Newman GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPND
USA300_FPR3757 GRFNRHWSSSKGQGLWMSVVLRPNVAFSMISKFNLFIALGIRDAIQHFSQDEVKVKWPND
************************************************************
COL IYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLD
N315 IYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLD
NCTC8325 IFIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLD
Newman IYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLD
USA300_FPR3757 IYIDNGKVCGFLTEMVANNDGIEAIICGIGINLTQQLENFDESIRHRATSIQLHDKNKLD
*:**********************************************************
COL RYQFLEILLQEIEKRYNQFLTLPFSEIREEYTAASNIWNRTLLFTENDKQFKGQAIDLDY
N315 RYQFLERLLQEIEKRYNQFLTLPFSEIREEYIAASNIWNRTLLFTENDKQFKGQAIDLDY
NCTC8325 RYQFLEILLQEIEKRYNQFLTLPFSEIREEYTAASNIWNRTLLFTENDKQFKGQAIDLDY
Newman RYQFLEILLQEIEKRYNQFLTLPFSEIREEYTAASNIWNRTLLFTENDKQFKGQAIDLDY
USA300_FPR3757 RYQFLEILLQEIEKRYNQFLTLPFSEIREEYTAASNIWNRTLLFTENDKQFKGQAIDLDY
****** ************************ ****************************
COL DGYLIVRDEAGESHRLISADIDF
N315 DGYLIVRDEAGESHRLISADIDF
NCTC8325 DGYLIVRDEAGESHRLISADIDF
Newman DGYLIVRDEAGESHRLISADIDF
USA300_FPR3757 DGYLIVRDEAGESHRLISADIDF
***********************