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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003914000
- symbol?: asnC
- synonym:
- description?: asparagine--tRNA ligase
- asparagine--tRNA ligase
- asparaginyl-tRNA synthetase
- asparaginyl-tRNA synthetase, putative
- putative asparaginyl-tRNA synthetase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4232396..4233688
- synteny block?: BlockID0029600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1410 (asnS)
08BA02176:
C248_1494 (asnS)
11819-97:
MS7_1410 (asnS)
6850:
RSAU_001326 (asnS)
71193:
ST398NM01_1454
ECT-R 2:
ECTR2_1308 (asnS)
ED133:
SAOV_1462 (asnS)
ED98:
SAAV_1441 (asnC)
HO 5096 0412:
SAEMRSA15_13150 (asnS)
JH1:
SaurJH1_1542 (asnC)
JH9:
SaurJH9_1513 (asnC)
JKD6008:
SAA6008_01423 (asnC)
JKD6159:
SAA6159_01319 (asnC)
LGA251:
SARLGA251_13680 (asnS)
M013:
M013TW_1402
MRSA252:
SAR1465 (asnC)
MSHR1132:
SAMSHR1132_12940
MSSA476:
SAS1397 (asnC)
Mu3:
SAHV_1442 (asnC)
Mu50:
SAV1454 (asnC)
MW2:
MW1344 (asnC)
RF122:
SAB1318c (asnC)
ST398:
SAPIG1454 (asnS)
T0131:
SAT0131_01543
TCH60:
HMPREF0772_11750 (asnS)
TW20:
SATW20_14530 (asnS)
USA300_TCH1516:
USA300HOU_1392 (asnC)
VC40:
SAVC_06525 (asnC)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLA
N315 MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLA
NCTC8325 MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLA
Newman MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLA
USA300_FPR3757 MKTTIKQAKDHLNQDVTIGAWLTNKRSSGKIAFLQLRDGTGFMQGVVVKSEVDEEVFKLA
************************************************************
COL KEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYPITPKNHGTEFLMDHRHLW
N315 KEIAQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYPITPKNHGTEFLMDHRHLW
NCTC8325 KEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYPITPKNHGTEFLMDHRHLW
Newman KEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYPITPKNHGTEFLMDHRHLW
USA300_FPR3757 KEITQESSLYVTGTITEDNRSDLGYEMQVKSIEVISEAHDYPITPKNHGTEFLMDHRHLW
***:********************************************************
COL LRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFL
N315 LRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFL
NCTC8325 LRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFL
Newman LRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFL
USA300_FPR3757 LRSKKQHAVMKIRNEVIRATYEFFNKDGFTKVDPPILTASAPEGTSELFHTKYFDQDAFL
************************************************************
COL SQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQ
N315 SQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQ
NCTC8325 SQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQ
Newman SQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQ
USA300_FPR3757 SQSGQLYLEAAAMAHGKVFSFGPTFRAEKSKTRRHLIEFWMIEGEMAFTNHAESLEIQEQ
************************************************************
COL YVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDF
N315 YVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDF
NCTC8325 YVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDF
Newman YVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDF
USA300_FPR3757 YVTHVVKSVLENCKLELKILERDTSKLEKVATPFPRISYDDAIEFLKAEGFDDIEWGEDF
************************************************************
COL GAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSER
N315 GAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSER
NCTC8325 GAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSER
Newman GAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSER
USA300_FPR3757 GAPHETAIANHYDLPVFITNYPTKIKPFYMQPNPENEETVLCADLIAPEGYGEIIGGSER
************************************************************
COL VDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAP
N315 VDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAP
NCTC8325 VDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAP
Newman VDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAP
USA300_FPR3757 VDDLELLEQRVKEHGLDEEAYSYYLDLRRYGSVPHCGFGLGLERTVAWISGVEHVRETAP
************************************************************
COL FPRLLNRLYP
N315 FPRLLNRLYP
NCTC8325 FPRLLNRLYP
Newman FPRLLNRLYP
USA300_FPR3757 FPRLLNRLYP
**********