⊟Summary[edit | edit source]

pan ID^?: SAUPAN003830000
symbol^?: sucB
synonym:
description^?: dihydrolipoamide succinyltransferase
- dihydrolipoamide succinyltransferase
- dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
- dihydrolipoamide succinyltransferase, putative
- dihydrolipoyllysine-residue succinyltransferase
- Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex
- dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex
- dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex
- dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex
strand^?: -
coordinates^?: 4119140..4120514
synteny block^?: BlockID0028870
occurrence^?: in 100% of 33 strains

⊟Orthologs[edit | edit source]

COL:

SACOL1448 (sucB)

N315:

SA1244 (odhB)

NCTC8325:

SAOUHSC_01416

Newman:

NWMN_1325 (sucB)

USA300_FPR3757:

SAUSA300_1305 (sucB)

04-02981:

SA2981_1366 (odhB)

08BA02176:

C248_1451 (odhB)

11819-97:

MS7_1368 (sucB)

6850:

RSAU_001292 (odhB)

71193:

ST398NM01_1414

ECT-R 2:

ECTR2_1269 (sucB)

ED133:

SAOV_1422c

ED98:

SAAV_1396 (sucB)

HO 5096 0412:

SAEMRSA15_12750 (odhB)

JH1:

SaurJH1_1502

JH9:

SaurJH9_1473

JKD6008:

SAA6008_01378 (odhB)

JKD6159:

SAA6159_01279 (odhB)

LGA251:

SARLGA251_13290 (odhB)

M013:

M013TW_1357

MRSA252:

SAR1424 (odhB)

MSHR1132:

SAMSHR1132_12530

MSSA476:

SAS1355

Mu3:

SAHV_1400 (odhB)

Mu50:

SAV1412 (odhB)

MW2:

MW1302 (odhB)

RF122:

SAB1268c (odhB)

ST398:

SAPIG1414 (sucB)

T0131:

SAT0131_01490

TCH60:

HMPREF0772_11797 (sucB)

TW20:

SATW20_14130 (odhB)

USA300_TCH1516:

USA300HOU_1347 (odhB)

VC40:

SAVC_06310

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

alignment of orthologues:
CLUSTAL format alignment by MAFFT L-INS-i (v7.307)

COL             MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA
N315            MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA
NCTC8325        MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA
Newman          MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA
USA300_FPR3757  MPEVKVPELAESITEGTIAEWLKNVGDSVEKGEAILELETDKVNVEVVSEEAGVLSEQLA
                ************************************************************

COL             SEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQAND
N315            SEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQAND
NCTC8325        SEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQAND
Newman          SEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQAND
USA300_FPR3757  SEGDTVEVGQAIAIIGEGSGNASKENSNDNTPQQNEETNNKKEETTNNSVDKAEVNQAND
                ************************************************************

COL             DNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDIDKKQQAPASTQTTQQASAKEE
N315            DNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDIDKKQQAPASTQTTQQAPAKEE
NCTC8325        DNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDIDKKQQAPASTQTTQQASAKEE
Newman          DNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDIDKKQQAPASTQTTQQASAKEE
USA300_FPR3757  DNQQRINATPSARRYARENGVNLAEVSPKTNDVVRKEDIDKKQQAPASTQTTQQASAKEE
                *******************************************************.****

COL             KKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFM
N315            KKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFM
NCTC8325        KKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFM
Newman          KKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFM
USA300_FPR3757  KKYNQYPTKPVIREKMSRRKKTAAKKLLEVSNNTAMLTTFNEVDMTNVMELRKRKKEQFM
                ************************************************************

COL             KDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFV
N315            KDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFV
NCTC8325        KDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFV
Newman          KDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFV
USA300_FPR3757  KDHDGTKLGFMSFFTKASVAALKKYPEVNAEIDGDDMITKQYYDIGVAVSTDDGLLVPFV
                ************************************************************

COL             RDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAA
N315            RDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAA
NCTC8325        RDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAA
Newman          RDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAA
USA300_FPR3757  RDCDKKNFAEIEAEIANLAVKAREKKLGLDDMVNGSFTITNGGIFGSMMSTPIINGNQAA
                ************************************************************

COL             ILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL
N315            ILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL
NCTC8325        ILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL
Newman          ILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL
USA300_FPR3757  ILGMHSIITRPIAIDQDTIENRPMMYIALSYDHRIIDGKEAVGFLKTIKELIENPEDLLL
                ************************************************************

COL             ES
N315            ES
NCTC8325        ES
Newman          ES
USA300_FPR3757  ES
                **

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Contents

⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

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⊟Summary[edit | edit source]

⊟Orthologs[edit | edit source]

⊟Genome Viewer[edit | edit source]

⊟Alignments[edit | edit source]