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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003764000
- symbol?: trpD
- synonym:
- description?: anthranilate phosphoribosyltransferase
- anthranilate phosphoribosyltransferase
- anthranilate phosphoribosyltransferase (pseudogene)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4061767..4062774
- synteny block?: BlockID0028260
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1323 (trpD)
08BA02176:
C248_1407 (trpD)
11819-97:
MS7_1326 (trpD)
6850:
RSAU_001250 (trpD)
71193:
ST398NM01_1370
ECT-R 2:
ECTR2_1226 (trpD)
ED133:
SAOV_1379
ED98:
SAAV_1351 (trpD)
HO 5096 0412:
SAEMRSA15_12170 (trpD)
JH1:
SaurJH1_1459 (trpD)
JH9:
SaurJH9_1430 (trpD)
JKD6008:
SAA6008_01334 (trpD)
JKD6159:
SAA6159_01235 (trpD)
LGA251:
SARLGA251_12780 (trpD)
M013:
M013TW_1315
MRSA252:
SAR1382 (trpD)
MSHR1132:
SAMSHR1132_12120
MSSA476:
SAS1309 (trpD)
Mu3:
SAHV_1357 (trpD)
Mu50:
SAV1369 (trpD)
MW2:
MW1256 (trpD)
RF122:
SAB1224 (trpD)
ST398:
SAPIG1370 (trpD)
T0131:
SAT0131_01441 (gpmA)
TCH60:
HMPREF0772_11838 (trpD)
TW20:
SATW20_13690 (trpD)
USA300_TCH1516:
USA300HOU_1304 (trpD)
VC40:
SAVC_06095 (trpD)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLI
N315 MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLI
NCTC8325 MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLI
Newman MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLI
USA300_FPR3757 MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLI
************************************************************
COL NTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTD
N315 NTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTD
NCTC8325 NTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTD
Newman NTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTD
USA300_FPR3757 NTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTD
************************************************************
COL LLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLIN
N315 LLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLIN
NCTC8325 LLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLIN
Newman LLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLIN
USA300_FPR3757 LLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLIN
************************************************************
COL PYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGE
N315 PYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGE
NCTC8325 PYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGE
Newman PYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGE
USA300_FPR3757 PYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGE
************************************************************
COL IKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVA
N315 IKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVA
NCTC8325 IKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVA
Newman IKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVA
USA300_FPR3757 IKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVA
************************************************************
COL EKVDTIAEGIELATTLIDNGEALEKYHQMRGE
N315 EKVDTIAEGIELATTLIDNGEALKKYHQMRGE
NCTC8325 EKVDTIAEGIELATTLIDNGEALEKYHQMRGE
Newman EKVDTIAEGIELATTLIDNGEALEKYHQMRGE
USA300_FPR3757 EKVDTIAEGIELATTLIDNGEALEKYHQMRGE
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