Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003758000
- symbol?: tyrA
- synonym:
- description?: prephenate dehydrogenase
- prephenate dehydrogenase
- Arogenate dehydrogenase
- prephenate dehydrogenase (PDH)
- prephenate dehydrogenase family protein
- TyrAp/ACT domain, NAD-specific
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4057005..4058097
- synteny block?: BlockID0028210
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1319 (tyrA)
08BA02176:
C248_1403 (tyrA)
11819-97:
MS7_1322
6850:
RSAU_001246 (tyrA)
71193:
ST398NM01_1366
ECT-R 2:
ECTR2_1222
ED133:
SAOV_1375c
ED98:
SAAV_1345 (tyrA)
HO 5096 0412:
SAEMRSA15_12130
JH1:
SaurJH1_1455
JH9:
SaurJH9_1426
JKD6008:
SAA6008_01330 (tyrA)
JKD6159:
SAA6159_01231 (tyrA)
LGA251:
SARLGA251_12740
M013:
M013TW_1311
MRSA252:
SAR1378
MSHR1132:
SAMSHR1132_12080
MSSA476:
SAS1305
Mu3:
SAHV_1353 (tyrA)
Mu50:
SAV1365 (tyrA)
MW2:
MW1252 (tyrA)
RF122:
SAB1220c
ST398:
SAPIG1366
T0131:
SAT0131_01437
TCH60:
HMPREF0772_11842 (tyrA)
TW20:
SATW20_13650
USA300_TCH1516:
USA300HOU_1300 (tyrA)
VC40:
SAVC_06075
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK
N315 MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK
NCTC8325 MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADISQLDKAKSIGIINEKCLNYSEAIK
Newman MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK
USA300_FPR3757 MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIK
*********************************** ************************
COL KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECNLLKHNIHLVSGH
N315 KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHESNLLKHNIHLVSGH
NCTC8325 KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECNLLKHNIHLVSGH
Newman KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECNLLKHNIHLVSGH
USA300_FPR3757 KADVIIYATPVAITNKYLSELIDMPTKPGVIVSDTGSTKAMIQQHECNLLKHNIHLVSGH
**********************************************.*************
COL PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY
N315 PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY
NCTC8325 PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY
Newman PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY
USA300_FPR3757 PMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDY
************************************************************
COL VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNK
N315 VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNK
NCTC8325 VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNK
Newman VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNK
USA300_FPR3757 VTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNK
************************************************************
COL TYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVD
N315 TYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVD
NCTC8325 TYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVD
Newman TYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVD
USA300_FPR3757 TYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVD
************************************************************
COL IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC
N315 IPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC
NCTC8325 IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC
Newman IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC
USA300_FPR3757 IPDESGMISKVTYILSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDC
**************:*********************************************
COL YIQ
N315 YIQ
NCTC8325 YIQ
Newman YIQ
USA300_FPR3757 YIQ
***