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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003744000
- symbol?: alsT
- synonym:
- description?: alanine:cation symporter family protein
- alanine:cation symporter family protein
- sodium:alanine symporter family protein
- amino acid carrier protein
- sodium:alanine symporter family protein, putative
- amino-acid carrier protein alsT
- AGCS family alanine/glycine:sodium (Na+) symporter
- AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter
- amino acid carrier family protein
- amino acid carrier protein (sodium/alanine symporter)
- Na(+)-linked D-alanine glycine permease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4042442..4043938
- synteny block?: BlockID0028070
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1310 (alsT)
08BA02176:
C248_1393
11819-97:
MS7_1314
6850:
RSAU_001238 (alsT)
71193:
ST398NM01_1358
ECT-R 2:
ECTR2_1214 (agcS)
ED133:
SAOV_1368
ED98:
SAAV_1337
HO 5096 0412:
SAEMRSA15_12040
JH1:
SaurJH1_1445
JH9:
SaurJH9_1418
JKD6008:
SAA6008_01321
JKD6159:
SAA6159_01222
LGA251:
SARLGA251_12660
M013:
M013TW_1303
MRSA252:
SAR1368
MSHR1132:
SAMSHR1132_12000
MSSA476:
SAS1296
Mu3:
SAHV_1344 (alsT)
Mu50:
SAV1356 (alsT)
MW2:
MW1243 (alsT)
RF122:
SAB1213
ST398:
SAPIG1358
T0131:
SAT0131_01427
TCH60:
HMPREF0772_11853 (agcS)
TW20:
SATW20_13570
USA300_TCH1516:
USA300HOU_1290 (alsT)
VC40:
SAVC_06025
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
N315 MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
NCTC8325 MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
Newman MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
USA300_FPR3757 MKDFDSLIPGWFKEFVHVGTDLIWSQYLIGLLLTAGFFFTISSKFVQLRMLPEMFRALVE
************************************************************
COL RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
N315 RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
NCTC8325 RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
Newman RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
USA300_FPR3757 RPETLEDGKKGISPFQAFAISAGSRVGTGNIAGVATAIVLGGPGAVFWMWVIAFIGAASA
************************************************************
COL FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
N315 FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
NCTC8325 FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
Newman FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
USA300_FPR3757 FIEATLAQVYKVHDKDGGFRGGPAYYITKGLNQKWLGIVFAILITITFAFVFNTVQSNTI
************************************************************
COL AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
N315 AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
NCTC8325 AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
Newman AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
USA300_FPR3757 AESLNTQYNISPVITGIILAIVTAIIIFGGVRSIATLSSLIVPIMAIIYIGMVLVILLFN
************************************************************
COL LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
N315 LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
NCTC8325 LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
Newman LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
USA300_FPR3757 LDQIVPMIGTIIKSAFGIEQVTGGAVGAAVLQGIKRGLFSNEAGMGSAPNAAATAAVPHP
************************************************************
COL VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
N315 VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
NCTC8325 VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
Newman VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
USA300_FPR3757 VKQGLIQSLGVFFDTMLVCTATAIMILLYSGLKFGDNAPQGVAVTQSALNEHLGSAGGIF
************************************************************
COL LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
N315 LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
NCTC8325 LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
Newman LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
USA300_FPR3757 LTIAVTLFAFSSVVGNYYYGQSNIEFLSTNRVILFIFRCLVVVLVFVGAVVKTETVWNTA
************************************************************
COL DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
N315 DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
NCTC8325 DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
Newman DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
USA300_FPR3757 DLFMGLMAIVNIISIIGLSNVAFALMKDYQKQKKEGKNPVFKPENLEINLFGISAWGANK
************************************************************
COL YKNSDKQIFLM
N315 YKNSDK-----
NCTC8325 YKNSDK-----
Newman YKNSDK-----
USA300_FPR3757 YKNSDK-----
******