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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003720000
- symbol?: —
- synonym:
- description?: membrane protein
- membrane protein
- CcdC family protein
- CcdC protein
- membrane protein CcdC involved in cytochrome C biogenesis
- Membrane protein involved in cytochrome C biogenesis
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4020878..4021345
- synteny block?: BlockID0027860
- occurrence?: in 97% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1299
08BA02176:
C248_1380
11819-97:
MS7_1303
6850:
RSAU_001226
71193:
ST398NM01_1346
ECT-R 2:
ECTR2_1203
ED133:
SAOV_1357
ED98:
SAAV_1325
HO 5096 0412:
SAEMRSA15_11910
JH1:
SaurJH1_1433
JH9:
SaurJH9_1406
JKD6008:
SAA6008_01310 (ccdC)
JKD6159:
SAA6159_01211 (ccdC)
LGA251:
SARLGA251_12530
M013:
M013TW_1292
MRSA252:
SAR1355
MSHR1132:
SAMSHR1132_11890
MSSA476:
SAS1284
Mu3:
SAHV_1333
Mu50:
SAV1344
MW2:
MW1231
RF122:
SAB1202
ST398:
SAPIG1346
T0131:
SAT0131_01415 (nasE)
TCH60:
HMPREF0772_11864
TW20:
SATW20_13460
USA300_TCH1516:
—
VC40:
SAVC_05960
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
N315 MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
NCTC8325 -------------MGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
Newman MLYLIFSIIVALFMGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
USA300_FPR3757 -------------MGTIVIVIRMKAQNYPVNEKKIVLPPFFMATGALMYVVPYFRLTGSE
***********************************************
COL MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
N315 MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
NCTC8325 MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
Newman MLEAFIVGLLFSTDLIWTSRFEVKGTEIYMERSIAFPVILISLLIIRTVMKIFISNEIDP
USA300_FPR3757 MLEAFIIGLLFSTVLIWTSRFEVKGTEIYMKRSKAFPVILISLLIIRTVMKIFISNEIDP
******:****** ****************:** **************************
COL GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
N315 GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
NCTC8325 GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
Newman GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
USA300_FPR3757 GELGGMFFLLAFCMIVPWRAAMLYKYKKLKKTLIN
***********************************