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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003707000
- symbol?: katA
- synonym:
- description?: catalase
- strand?: +
- coordinates?: 4011246..4012769
- synteny block?: BlockID0027730
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1289 (katA)
08BA02176:
C248_1370
11819-97:
MS7_1293 (katA)
6850:
RSAU_001216 (katA)
71193:
ST398NM01_1336
ECT-R 2:
ECTR2_1193
ED133:
SAOV_1347
ED98:
SAAV_1314 (kataA)
HO 5096 0412:
SAEMRSA15_11810
JH1:
SaurJH1_1422
JH9:
SaurJH9_1395
JKD6008:
SAA6008_01300 (katE)
JKD6159:
SAA6159_01201 (katE)
LGA251:
SARLGA251_12430 (katA)
M013:
M013TW_1282
MRSA252:
SAR1344
MSHR1132:
SAMSHR1132_11790
MSSA476:
SAS1274
Mu3:
SAHV_1323 (katA)
Mu50:
SAV1334 (katA)
MW2:
MW1221 (katA)
RF122:
SAB1192
ST398:
SAPIG1336
T0131:
SAT0131_01405
TCH60:
HMPREF0772_11874 (kataA)
TW20:
SATW20_13360 (katA)
USA300_TCH1516:
USA300HOU_1277 (katA)
VC40:
SAVC_05910
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ----------------------------------MQDIYFLEQMSQFDREVIPERRMHAK
N315 MTMSQQDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAK
NCTC8325 ----------------------------------MQDIYFLEQMSQFDREVIPERRMHAK
Newman MTMSQQDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAK
USA300_FPR3757 --MSQQDKKLTGVFGHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAK
**************************
COL GSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFY
N315 GSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFY
NCTC8325 GSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFY
Newman GSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFY
USA300_FPR3757 GSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFY
************************************************************
COL TEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVT
N315 TEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVT
NCTC8325 TEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVT
Newman TEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVT
USA300_FPR3757 TEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEALHQVT
************************************************************
COL ILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATD
N315 ILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATD
NCTC8325 ILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATD
Newman ILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATD
USA300_FPR3757 ILMSDRGIPKDLRHMHGFGSHTYSMYNDSGERVWVKFHFRTQQGIENLTDEEAAEIIATD
************************************************************
COL RDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFE
N315 RDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFE
NCTC8325 RDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFE
Newman RDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFE
USA300_FPR3757 RDSSQRDLFEAIEKGDYPKWTMYIQVMTEEQAKNHKDNPFDLTKVWYHDEYPLIEVGEFE
************************************************************
COL LNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQ
N315 LNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQ
NCTC8325 LNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQ
Newman LNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQ
USA300_FPR3757 LNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQ
************************************************************
COL PKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYN
N315 PKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYN
NCTC8325 PKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYN
Newman PKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYN
USA300_FPR3757 PKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYN
************************************************************
COL QRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKG
N315 QRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKG
NCTC8325 QRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKG
Newman QRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKG
USA300_FPR3757 QRQDDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEGVTDDVKRRHIRHCYKADPEYGKG
************************************************************
COL VAKALGIDINSIDLETENDETYENFEK
N315 VAKALGIDINSIDLETENDETYENFEK
NCTC8325 VAKALGIDINSIDLETENDETYENFEK
Newman VAKALGIDINSIDLETENDETYENFEK
USA300_FPR3757 VAKALGIDINSIDLETENDETYENFEK
***************************