PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003700000
• symbol^?: hom
• synonym:
• description^?: homoserine dehydrogenase

  descriptions from strain specific annotations:

  • homoserine dehydrogenase
  • homoserine dehydrogenase family protein
  • putative homoserine dehydrogenase
• strand^?: +
• coordinates^?: 4004318..4005634
• synteny block^?: BlockID0027660
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1362 (hom)
N315:
SA1164 (dhoM)
NCTC8325:
SAOUHSC_01320
Newman:
NWMN_1240 (metL)
USA300_FPR3757:
SAUSA300_1226
04-02981:
SA2981_1283 (dhoM)
08BA02176:
C248_1363
11819-97:
MS7_1287
6850:
RSAU_001210 (dhoM)
71193:
ST398NM01_1330
ECT-R 2:
ECTR2_1187
ED133:
SAOV_1341
ED98:
SAAV_1308
HO 5096 0412:
SAEMRSA15_11750
JH1:
SaurJH1_1416
JH9:
SaurJH9_1389
JKD6008:
SAA6008_01293 (dhoM)
JKD6159:
SAA6159_01195 (dhoM)
LGA251:
SARLGA251_12370
M013:
M013TW_1276
MRSA252:
SAR1338
MSHR1132:
SAMSHR1132_11730
MSSA476:
SAS1268
Mu3:
SAHV_1317 (dhoM)
Mu50:
SAV1328 (dhoM)
MW2:
MW1215 (dhoM)
RF122:
SAB1186
ST398:
SAPIG1330
T0131:
SAT0131_01398
TCH60:
HMPREF0772_11880 (thrA)
TW20:
SATW20_13300
USA300_TCH1516:
USA300HOU_1273 (thrA)
VC40:
SAVC_05880

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHL
  N315            MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHL
  NCTC8325        MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHL
  Newman          MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHL
  USA300_FPR3757  MKKLNIALLGLGTVGSGVVKIIEENRQQIQDTLNKDIVIKHILVRDKSKKRPLNISQYHL
                  ************************************************************
  
  COL             TEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAE
  N315            TEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAE
  NCTC8325        TEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAE
  Newman          TEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAE
  USA300_FPR3757  TEDVNEILNDDSLDIIVEVMGGIEPTVDWLRTALKNKKHVITANKDLLAVHLKLLEDLAE
                  ************************************************************
  
  COL             ENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEAL
  N315            ENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEAL
  NCTC8325        ENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEAL
  Newman          ENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEAL
  USA300_FPR3757  ENGVALKFEASVAGGIPIVNAINNGLNANNISKFMGILNGTSNFILSKMTKEQTTFEEAL
                  ************************************************************
  
  COL             DEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVAD
  N315            DEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVAD
  NCTC8325        DEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVAD
  Newman          DEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVAD
  USA300_FPR3757  DEAKRLGFAEADPTDDVEGVDAARKVVITSYLSFNQVIKLNDVKRRGISGVTLTDINVAD
                  ************************************************************
  
  COL             QLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKG
  N315            QLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKG
  NCTC8325        QLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKG
  Newman          QLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKG
  USA300_FPR3757  QLGYKIKLIGKGIYENGKVNASVEPTLIDKKHQLAAVEDEYNAIYVIGDAVGDTMFYGKG
                  ************************************************************
  
  COL             AGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVV
  N315            AGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVV
  NCTC8325        AGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVV
  Newman          AGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVV
  USA300_FPR3757  AGSLATGSAVVSDLLNVALFFESDLHTLPPHFELKTDKTREMMDSDAEINIKEKSNFFVV
                  ************************************************************
  
  COL             VNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKV
  N315            VNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKV
  NCTC8325        VNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKV
  Newman          VNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKV
  USA300_FPR3757  VNHVKGSIENFENELKAILPFHRSLRVANYDNQSYAAVIVGLESSPEELITKHGYEVDKV
                  ************************************************************
  
  COL             YPVEGV
  N315            YPVEGV
  NCTC8325        YPVEGV
  Newman          YPVEGV
  USA300_FPR3757  YPVEGV
                  ******