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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003694000
- symbol?: nuc2
- synonym:
- description?: thermonuclease
- thermonuclease
- thermonuclease family protein
- thermonuclease (TNase) (Micrococcal nuclease)(Staphylococcal nuclease)
- thermonuclease precursor family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3998783..3999380
- synteny block?: BlockID0027600
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1279 (nuc)
08BA02176:
C248_1358 (nucI)
11819-97:
MS7_1283 (nucH)
6850:
RSAU_001206 (nuc)
71193:
ST398NM01_1326
ECT-R 2:
ECTR2_1183
ED133:
SAOV_1337 (nucI)
ED98:
SAAV_1303
HO 5096 0412:
SAEMRSA15_11710 (nucI)
JH1:
SaurJH1_1412
JH9:
SaurJH9_1385
JKD6008:
SAA6008_01288 (nuc)
JKD6159:
SAA6159_01191
LGA251:
SARLGA251_12330 (nucI)
M013:
M013TW_1272
MRSA252:
SAR1334 (nucI)
MSHR1132:
SAMSHR1132_11690
MSSA476:
SAS1264
Mu3:
SAHV_1313 (nuc)
Mu50:
SAV1324 (nuc)
MW2:
MW1211 (nuc)
RF122:
SAB1182 (nucI)
ST398:
SAPIG1326
T0131:
SAT0131_01393
TCH60:
HMPREF0772_11884 (nucI)
TW20:
SATW20_13260 (nucI)
USA300_TCH1516:
USA300HOU_1268 (nucA)
VC40:
SAVC_05860
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTF
N315 MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTF
NCTC8325 MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTF
Newman MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTF
USA300_FPR3757 MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTF
************************************************************
COL IANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTNQDVYLEYDKEKQDRY
N315 IANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTNQDVYLEYDKEKQDRY
NCTC8325 IANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTNQDVYLEYDKEKQDRY
Newman IANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTNQDVYLEYDKEKQDRY
USA300_FPR3757 IANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTNQDVYLEYDKEKQDRY
************************************************************
COL GRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVFIEAQNKAKQQKLNIWSK
N315 GRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVFIEAQNKAKQQKLNIWSK
NCTC8325 GRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVFIEAQNKAKQQKLNIWSK
Newman GRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVFIEAQNKAKQQKLNIWSK
USA300_FPR3757 GRTLAYVWISKDRMYNKELVEKGLAREKYFSPNGKYRNVFIEAQNKAKQQKLNIWSK
*********************************************************