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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003564000
- symbol?: proS
- synonym:
- description?: prolyl-tRNA synthetase
- prolyl-tRNA synthetase
- proline--tRNA ligase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3897764..3899467
- synteny block?: BlockID0026410
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1221 (proS)
08BA02176:
C248_1296 (proS)
11819-97:
MS7_1221 (proS)
6850:
RSAU_001145 (proS)
71193:
ST398NM01_1265
ECT-R 2:
ECTR2_1119 (proS)
ED133:
SAOV_1265
ED98:
SAAV_1238 (proS)
HO 5096 0412:
SAEMRSA15_10960 (proS)
JH1:
SaurJH1_1349
JH9:
SaurJH9_1323
JKD6008:
SAA6008_01218 (proS)
JKD6159:
SAA6159_01118 (proS)
LGA251:
SARLGA251_11740 (proS)
M013:
M013TW_1203
MRSA252:
SAR1239 (proS)
MSHR1132:
SAMSHR1132_11060
MSSA476:
SAS1197
Mu3:
SAHV_1253 (proS)
Mu50:
SAV1263 (proS)
MW2:
MW1146 (proS)
RF122:
SAB1125 (proS)
ST398:
SAPIG1265 (proS)
T0131:
SAT0131_01316
TCH60:
HMPREF0772_11966 (proS)
TW20:
SATW20_12570 (proS)
USA300_TCH1516:
USA300HOU_1195 (proS)
VC40:
SAVC_05480
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
N315 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
NCTC8325 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
Newman MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
USA300_FPR3757 MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQE
************************************************************
COL MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
N315 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
NCTC8325 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
Newman MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
USA300_FPR3757 MERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRN
************************************************************
COL ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
N315 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
NCTC8325 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
Newman ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
USA300_FPR3757 ELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQA
************************************************************
COL YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
N315 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
NCTC8325 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
Newman YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
USA300_FPR3757 YSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVY
************************************************************
COL EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
N315 EPNHKHSTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
NCTC8325 EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
Newman EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
USA300_FPR3757 EPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEI
******:*****************************************************
COL NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
N315 NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
NCTC8325 NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
Newman NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
USA300_FPR3757 NDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGAN
************************************************************
COL EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSES
N315 EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
NCTC8325 EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
Newman EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
USA300_FPR3757 EDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGVAHFAEGIEVGQVFKLGTKYSES
*************************************.**********************
COL MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
N315 MNATFLDNQGKAQPLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
NCTC8325 MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
Newman MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
USA300_FPR3757 MNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPK
*************.**********************************************
COL KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
N315 KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
NCTC8325 KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
Newman KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
USA300_FPR3757 KDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVK
************************************************************
COL ERLTGDSEEVHIDDLMTVITNKYDNLK
N315 ERLTGDSEEVHIDDLMTVITNKYDNLK
NCTC8325 ERLTGDSEEVHIDDLMTVITNKYDNLK
Newman ERLTGDSEEVHIDDLMTVITNKYDNLK
USA300_FPR3757 ERLTGDSEEVHIDDLMTVITNKYDNLK
***************************