PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003537000
• symbol^?: sucC
• synonym:
• description^?: succinyl-CoA synthetase subunit beta

  descriptions from strain specific annotations:

  • succinyl-CoA synthetase subunit beta
  • succinyl-CoA ligase subunit beta
  • ADP-forming succinate--CoA ligase subunit beta
  • succinyl-CoA synthetase, beta subunit
  • putative CoA synthetase protein
  • succinate--CoA ligase (ADP-forming) beta subunit
  • Succinyl-CoA ligase [ADP-forming] beta chain
  • Succinyl-CoA ligase [ADP-forming] subunit beta
  • Succinyl-CoA ligase beta chain
  • succinyl-CoA synthase subunit beta
  • succinyl-CoA synthetase beta chain (SCS-alpha)(Vegetative protein 63) (VEG63)
• strand^?: +
• coordinates^?: 3876383..3877549
• synteny block^?: BlockID0026140
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1262 (sucC)
N315:
SA1088 (sucC)
NCTC8325:
SAOUHSC_01216 (sucC)
Newman:
NWMN_1155 (sucC)
USA300_FPR3757:
SAUSA300_1138 (sucC)
04-02981:
SA2981_1203 (sucC)
08BA02176:
C248_1276
11819-97:
MS7_1203 (sucC)
6850:
RSAU_001127 (sucC)
71193:
ST398NM01_1245
ECT-R 2:
ECTR2_1101 (sucC)
ED133:
SAOV_1248
ED98:
SAAV_1219 (sucC)
HO 5096 0412:
SAEMRSA15_10780
JH1:
SaurJH1_1329 (sucC)
JH9:
SaurJH9_1304 (sucC)
JKD6008:
SAA6008_01200 (sucC)
JKD6159:
SAA6159_01100 (sucC)
LGA251:
SARLGA251_11560
M013:
M013TW_1183
MRSA252:
SAR1221 (sucC)
MSHR1132:
SAMSHR1132_10880
MSSA476:
SAS1179 (sucC)
Mu3:
SAHV_1235 (sucC)
Mu50:
SAV1245 (sucC)
MW2:
MW1128 (sucC)
RF122:
SAB1109 (sucC)
ST398:
SAPIG1245
T0131:
SAT0131_01295
TCH60:
HMPREF0772_11986 (sucC)
TW20:
SATW20_12390
USA300_TCH1516:
USA300HOU_1176 (sucC)
VC40:
SAVC_05390 (sucC)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGV
  N315            MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGV
  NCTC8325        MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGV
  Newman          MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGV
  USA300_FPR3757  MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGV
                  ************************************************************
  
  COL             KIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQ
  N315            KIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQ
  NCTC8325        KIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQ
  Newman          KIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQ
  USA300_FPR3757  KIAKSLSEVETYAKELLGKTLVTHQTGPEGKEIKRLYIEEGCAIQKEYYVGFVIDRATDQ
                  ************************************************************
  
  COL             VTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKF
  N315            VTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKF
  NCTC8325        VTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKF
  Newman          VTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKF
  USA300_FPR3757  VTLMASEEGGTEIEEVAAKTPEKIFKETIDPVIGLSPFQARRIAFNINIPKESVNKAAKF
                  ************************************************************
  
  COL             LLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDP
  N315            LLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDP
  NCTC8325        LLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDP
  Newman          LLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDP
  USA300_FPR3757  LLALYNVFIEKDCSIVEINPLVTTADGDVLALDAKINFDDNALFRHKDVVELRDLEEEDP
                  ************************************************************
  
  COL             KEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTE
  N315            KEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTE
  NCTC8325        KEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTE
  Newman          KEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTE
  USA300_FPR3757  KEIEASKHDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDAGGSATREKVTE
                  ************************************************************
  
  COL             AFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKI
  N315            AFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKI
  NCTC8325        AFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKI
  Newman          AFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKI
  USA300_FPR3757  AFKIILGDENVKGIFVNIFGGIMKCDVIAEGIVEAVKEVDLTLPLVVRLEGTNVELGKKI
                  ************************************************************
  
  COL             LKDSGLAIEPAATMAEGAQKIVKLVKEA
  N315            LKDSGLAIEPAATMAEGAQKIVKLVKEA
  NCTC8325        LKDSGLAIEPAATMAEGAQKIVKLVKEA
  Newman          LKDSGLAIEPAATMAEGAQKIVKLVKEA
  USA300_FPR3757  LKDSGLAIEPAATMAEGAQKIVKLVKEA
                  ****************************