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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003492000
- symbol?: rpoZ
- synonym:
- description?: DNA-directed RNA polymerase subunit omega
- DNA-directed RNA polymerase subunit omega
- DNA-directed RNA polymerase, omega subunit
- DNA-directed RNA polymerase omega chain
- DNA-directed RNA polymerase omega subunit
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3831731..3831949
- synteny block?: BlockID0025710
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1168
08BA02176:
C248_1240 (rpoZ)
11819-97:
MS7_1168 (rpoZ)
6850:
RSAU_001092 (rpoZ)
71193:
ST398NM01_1208
ECT-R 2:
ECTR2_1066 (rpoZ)
ED133:
SAOV_1213
ED98:
SAAV_1182 (rpoZ)
HO 5096 0412:
SAEMRSA15_10430
JH1:
SaurJH1_1294 (rpoZ)
JH9:
SaurJH9_1269 (rpoZ)
JKD6008:
SAA6008_01165 (rpoZ)
JKD6159:
SAA6159_01063 (rpoZ)
LGA251:
SARLGA251_11210 (rpoZ)
M013:
M013TW_1148
MRSA252:
SAR1186 (rpoZ)
MSHR1132:
SAMSHR1132_10510
MSSA476:
SAS1144 (rpoZ)
Mu3:
SAHV_1200 (rpoZ)
Mu50:
SAV1210 (rpoZ)
MW2:
MW1093 (rpoZ)
RF122:
SAB1074 (rpoZ)
ST398:
SAPIG1208 (rpoZ)
T0131:
SAT0131_01259 (mobB)
TCH60:
HMPREF0772_12022 (rpoZ)
TW20:
SATW20_12040 (rpoZ)
USA300_TCH1516:
USA300HOU_1148 (rpoZ)
VC40:
SAVC_05215 (rpoZ)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHSFKPVGRALEEIADGKI
N315 MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHSFKPVGRALEEIADGKI
NCTC8325 MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHSFKPVGRALEEIADGKI
USA300_FPR3757 MLNPPLNQLTSQIKSKYLIATTAAKRAREIDEQPETELLSEYHSFKPVGRALEEIADGKI
************************************************************
COL RPVISSDYYGKE
N315 RPVISSDYYGKE
NCTC8325 RPVISSDYYGKE
USA300_FPR3757 RPVISSDYYGKE
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