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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003457000
- symbol?: —
- synonym:
- description?: laccase
- laccase
- peptidoglycan editing factor PgeF
- multicopper polyphenol oxidase
- multi-copper polyphenol oxidoreductase laccase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3803016..3803809
- synteny block?: BlockID0025370
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1145
08BA02176:
C248_1216
11819-97:
MS7_1144
6850:
RSAU_001068
71193:
ST398NM01_1184
ECT-R 2:
ECTR2_1043
ED133:
SAOV_1188
ED98:
SAAV_1158
HO 5096 0412:
SAEMRSA15_10200
JH1:
SaurJH1_1271
JH9:
SaurJH9_1246
JKD6008:
SAA6008_01141
JKD6159:
SAA6159_01038
LGA251:
SARLGA251_10980
M013:
M013TW_1121
MRSA252:
SAR1163
MSHR1132:
SAMSHR1132_10290
MSSA476:
SAS1121
Mu3:
SAHV_1177
Mu50:
SAV1187
MW2:
MW1070
RF122:
SAB1051
ST398:
SAPIG1184
T0131:
SAT0131_01234
TCH60:
HMPREF0772_12045
TW20:
SATW20_11810
USA300_TCH1516:
—
VC40:
SAVC_05100
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
N315 MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
NCTC8325 ------------------------------------------MARYIDDRPYNITQHQLQ
Newman MNDNFKKQPHHLIYEELLQQGITLGITTRGDGLSDYPKNAFNMARYIDDRPYNITQHQLQ
USA300_FPR3757 ------------------------------------------MARYIDDRPYNITQHQLQ
******************
COL LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
N315 LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
NCTC8325 LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
Newman LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
USA300_FPR3757 LAEEIAFDRKNWVFPIQTHENKVACITKDDIGTNIDTLTDALHGIDAMYTYDSNVLLTMC
************************************************************
COL YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
N315 YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
NCTC8325 YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
Newman YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
USA300_FPR3757 YADCVPVYFYSTKHHFIALAHAGWRGTYTEIVKEVLKHVNFDLKDLHVVIGPSTSSSYEI
************************************************************
COL NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
N315 NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAELLNYYGVPKENIYTTAYATSEHL
NCTC8325 NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
Newman NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
USA300_FPR3757 NDDIKNKFETLPIDSANYIETRGRDRHGIDLKKANAALLIYYGVPKENIYTTAYATSEHL
************************************ ** ********************
COL ELFFSYRLEKGQTGRMLAFIGQQ
N315 ELFFSYRLEKGQTGRMLAFIGQQ
NCTC8325 ELFFSYRLEKGQTGRMLAFIGQQ
Newman ELFFSYRLEKGQTGRMLAFIGQQ
USA300_FPR3757 ELFFSYRLEKGQTGRMLAFIGQQ
***********************