PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003390000
• symbol^?: murI
• synonym:
• description^?: glutamate racemase

  descriptions from strain specific annotations:

  • glutamate racemase
  • putative glutamate racemase
• strand^?: +
• coordinates^?: 3752768..3753568
• synteny block^?: BlockID0024730
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1161 (murI)
N315:
SA0997 (murI)
NCTC8325:
SAOUHSC_01106
Newman:
NWMN_1063
USA300_FPR3757:
SAUSA300_1049 (murI)
04-02981:
SA2981_1106 (murI)
08BA02176:
C248_1179 (murI)
11819-97:
MS7_1107 (murI)
6850:
RSAU_001034 (murI)
71193:
ST398NM01_1146
ECT-R 2:
ECTR2_1004 (murI)
ED133:
SAOV_1147
ED98:
SAAV_1118 (murI)
HO 5096 0412:
SAEMRSA15_09800 (murI)
JH1:
SaurJH1_1231
JH9:
SaurJH9_1209
JKD6008:
SAA6008_01104 (murI)
JKD6159:
SAA6159_01004 (murI)
LGA251:
SARLGA251_10620 (murI)
M013:
M013TW_1083
MRSA252:
SAR1123 (murI)
MSHR1132:
SAMSHR1132_09960
MSSA476:
SAS1084
Mu3:
SAHV_1141 (murI)
Mu50:
SAV1151 (murI)
MW2:
MW1033 (murI)
RF122:
SAB1014 (murI)
ST398:
SAPIG1146 (murI)
T0131:
SAT0131_01193
TCH60:
HMPREF0772_12083 (murI)
TW20:
SATW20_11440 (murI)
USA300_TCH1516:
USA300HOU_1086 (murI)
VC40:
SAVC_04915

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL
  N315            MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL
  NCTC8325        MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL
  Newman          MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL
  USA300_FPR3757  MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKL
                  ************************************************************
  
  COL             MEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTI
  N315            MEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTI
  NCTC8325        MEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTI
  Newman          MEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTI
  USA300_FPR3757  MEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTI
                  ************************************************************
  
  COL             KSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTV
  N315            KSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTV
  NCTC8325        KSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTV
  Newman          KSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTV
  USA300_FPR3757  KSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTV
                  ************************************************************
  
  COL             ILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATG
  N315            ILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATG
  NCTC8325        ILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATG
  Newman          ILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATG
  USA300_FPR3757  ILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATG
                  ************************************************************
  
  COL             DPTHITNIIKEWLNLSVNVERISVND
  N315            DPTHITNIIKEWLNLSVNVERISVND
  NCTC8325        DPTHITNIIKEWLNLSVNVERISVND
  Newman          DPTHITNIIKEWLNLSVNVERISVND
  USA300_FPR3757  DPTHITNIIKEWLNLSVNVERISVND
                  **************************