Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN003343000
- symbol?: ctaB
- synonym:
- description?: protoheme IX farnesyltransferase
- protoheme IX farnesyltransferase
- heme o synthase
- protoheme IX farnesyltransferase, putative
- Heme O synthase, protoheme IX farnesyltransferase COX10-CtaB
- heme A IX farnesyltransferase
- putative protoheme IX farnesyltransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3712253..3713167
- synteny block?: BlockID0024270
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1073 (ctaB)
08BA02176:
C248_1143 (ctaB)
11819-97:
MS7_1073 (cyoE)
6850:
RSAU_001001 (ctaB)
71193:
ST398NM01_1113
ECT-R 2:
ECTR2_971 (cyoE)
ED133:
SAOV_1058
ED98:
SAAV_1082 (ctaB)
HO 5096 0412:
SAEMRSA15_09460 (ctaB)
JH1:
SaurJH1_1198
JH9:
SaurJH9_1176
JKD6008:
SAA6008_01071 (ctaB)
JKD6159:
SAA6159_00971 (ctaB)
LGA251:
SARLGA251_10290 (ctaB)
M013:
M013TW_1048
MRSA252:
SAR1090 (ctaB)
MSHR1132:
SAMSHR1132_09630
MSSA476:
SAS1051
Mu3:
SAHV_1108 (ctaB)
Mu50:
SAV1116 (ctaB)
MW2:
MW0999 (ctaB)
RF122:
SAB0981 (ctaB)
ST398:
SAPIG1113 (cyoE)
T0131:
SAT0131_01155 (lacA)
TCH60:
HMPREF0772_12116 (cyoE)
TW20:
SATW20_11110 (ctaB)
USA300_TCH1516:
USA300HOU_1054 (ctaB)
VC40:
SAVC_04745
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVVMTNHSFLSSIPQILL
N315 MMSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVVMTNHSFLSSIPQILL
NCTC8325 -MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVVMTNHSFLSSIPQILL
Newman -MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVVMTNHSFLSSIPQILL
USA300_FPR3757 -MSKEHTLSQNISRVNFKELQQIIKMGLVQGNLIPAFAGAWLAVVMTNHSFLSSIPQILL
***********************************************************
COL MLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQNLLLLSFGMMLVGEICL
N315 MLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQNLLLLSFGMMLVGEICL
NCTC8325 MLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQNLLLLSFGMMLVGEICL
Newman MLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQNLLLLSFGMMLVGEICL
USA300_FPR3757 MLFGSTLIMGGACALNNYYDQDIDRIMPSKQNRPTVNNRITDQNLLLLSFGMMLVGEICL
************************************************************
COL FLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIEGQISLTA
N315 FLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIEGQISLTA
NCTC8325 FLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIEGQISLTA
Newman FLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIEGQISLTA
USA300_FPR3757 FLLNIPSGVLGLMGIVGYVSYYSIWSKRHTTWNTVIGSFPGAVPPLIGWVAIEGQISLTA
************************************************************
COL IALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIWLIILLPVPLL
N315 IALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIWLIILLPVPLL
NCTC8325 IALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIWLIILLPVPLL
Newman IALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIWLIILLPVPLL
USA300_FPR3757 IALFLVVFCWQPIHFYALAIKRKDEYALANIPMLPSVKGFKRTRVSMFIWLIILLPVPLL
************************************************************
COL LINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWATQMFIYSLNYLVIFFVLAVIVSL
N315 LINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWATQMFIYSLNYLVIFFVLAVIVSL
NCTC8325 LINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWATQMFIYSLNYLVIFFVLAVIVSL
Newman LINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWATQMFIYSLNYLVIFFVLAVIVSL
USA300_FPR3757 LINLGVVFVVLATLLNLGWIALGLTTFKKNSDQTKWATQMFIYSLNYLVIFFVLAVIVSL
************************************************************
COL LTLI
N315 LTLI
NCTC8325 LTLI
Newman LTLI
USA300_FPR3757 LTLI
****