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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003137000
- symbol?: opp3A
- synonym:
- description?: peptide ABC transporter substrate-binding protein
- peptide ABC transporter substrate-binding protein
- oligopeptide ABC transporter substrate-binding protein
- oligopeptide ABC transporter, substrate-binding lipoprotein oppA, putative
- oligopeptide ABC transporter oligopeptide-binding protein
- oligopeptide ABC superfamily ATP binding cassette transporter, binding protein
- Oligopeptide-binding protein
- transport system extracellular bindinglipoprotein
- 4-phytase
- extracellular solute-binding proteins, family 5 Middle family protein
- oligopeptide ABC superfamily ATP binding cassette transporter, binding protein, Opp3A
- oligopeptide ABC transporter, oligopeptide-binding protein
- Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein oppA
- oligopeptide ABC transporter substrate-binding protein OppA
- peptide binding protein OppA
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3520594..3522249
- synteny block?: BlockID0022290
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0945 (oppA)
08BA02176:
C248_1013
11819-97:
MS7_0945
6850:
RSAU_000864 (oppA1)
71193:
ST398NM01_0986
ECT-R 2:
ECTR2_845
ED133:
SAOV_0936
ED98:
SAAV_0951
HO 5096 0412:
SAEMRSA15_08190
JH1:
SaurJH1_1008
JH9:
SaurJH9_0989
JKD6008:
SAA6008_00943 (oppA)
JKD6159:
SAA6159_00847 (opp3A)
LGA251:
SARLGA251_09060
M013:
M013TW_0912
MRSA252:
SAR0953
MSHR1132:
SAMSHR1132_08380
MSSA476:
SAS0860
Mu3:
SAHV_0985
Mu50:
SAV0990
MW2:
MW0872
RF122:
SAB0856
ST398:
SAPIG0986
T0131:
SAT0131_01023
TCH60:
HMPREF0772_12255 (oppA)
TW20:
SATW20_09880
USA300_TCH1516:
USA300HOU_0948 (oppA1)
VC40:
SAVC_04120
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLTSLDTSLITDEISSEVT
N315 MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLTSLDTSLITDEISSEVT
NCTC8325 MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLTSLDTSLITDEISSEVT
Newman MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLTSLDTSLITDEISSEVT
USA300_FPR3757 MTRKFRTLILILIATIALSGCANDDGIYSDKGQVFRKILSSDLTSLDTSLITDEISSEVT
************************************************************
COL AQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDAKWSNGDKVTAQDFVYAWR
N315 AQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDAKWSNGDKVTAQDFVYAWR
NCTC8325 AQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDAKWSNGDKVTAQDFVYAWR
Newman AQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDAKWSNGDKVTAQDFVYAWR
USA300_FPR3757 AQTFEGLYTLGKGDKPVLGVAKAFPEKSKDGKTLKVKLRSDAKWSNGDKVTAQDFVYAWR
************************************************************
COL KTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALNDETLQIELEKPVPYINQLLA
N315 KTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALNDETLQIELEKPVPYINQLLA
NCTC8325 KTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALNDETLQIELEKPVPYINQLLA
Newman KTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALNDETLQIELEKPVPYINQLLA
USA300_FPR3757 KTVDPKTGSEFAYIMGDIKNASDISTGKKPVEQLGIKALNDETLQIELEKPVPYINQLLA
************************************************************
COL LNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWKQEDKTLLSKNQYYWDKKNVKLD
N315 LNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWKQEDKTLLSKNQYYWDKKNVKLD
NCTC8325 LNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWKQEDKTLLSKNQYYWDKKNVKLD
Newman LNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWKQEDKTLLSKNQYYWDKKNVKLD
USA300_FPR3757 LNTFAPQNEKVAKKYGKNYGTAADRAVYNGPFKVDDWKQEDKTLLSKNQYYWDKKNVKLD
************************************************************
COL KVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYKDNKGLNFVLTTGTFFVKMNEKQYP
N315 KVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYKDNKGLNFVLTSGTFFVKMNEKQYP
NCTC8325 KVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYKDNKGLNFVLTTGTFFVKMNEKQYP
Newman KVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYKDNKGLNFVLTTGTFFVKMNEKQYP
USA300_FPR3757 KVNYKVIKDLQAGASLYDTESVDDAVITADQVNKYKDNKGLNFVLTTGTFFVKMNEKQYP
**********************************************:*************
COL DFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDTLTAKGIAKAPNGKDYASTMNSPLKYN
N315 DFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDTLTAKGIAKAPNGKDYASTMNSPLKYN
NCTC8325 DFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDTLTAKGIAKAPNGKDYASTMNSPLKYN
Newman DFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDTLTAKGIAKAPNGKDYASTMNSPLKYN
USA300_FPR3757 DFKNKNLRLAIAQAIDKKGYVDSVKNNGSIPSDTLTAKGIAKAPNGKDYASTMNSPLKYN
************************************************************
COL PKEARAHWDKAKKELGKNEVTFSMNTEDTPDAKISAEYIKSQVEKNLPGVTLKIKQLPFK
N315 PKEARAHWDKAKKELGKNEVTFSMNTEDTPDAKISAEYIKSQVEKNLPGVTLKIKQLPFK
NCTC8325 PKEARAHWDKAKKELGKNEVTFSMNTEDTPDAKISAEYIKSQVEKNLPGVTLKIKQLPFK
Newman PKEARAHWDKAKKELGKNEVTFSMNTEDTPDAKISAEYIKSQVEKNLPGVTLKIKQLPFK
USA300_FPR3757 PKEARAHWDKAKKELGKNEVTFSMNTEDTPDAKISAEYIKSQVEKNLPGVTLKIKQLPFK
************************************************************
COL QRVSLELSNNFEASLSGWSADYPDPMAYLETMTTGSAQNNTDWGNKEYDQLLKVARTKLA
N315 QRVSLELSNNFEASLSGWSADYPDPMAYLETMTTGSAQNNTDWGNKEYDQLLKVARTKLA
NCTC8325 QRVSLELSNNFEASLSGWSADYPDPMAYLETMTTGSAQNNTDWGNKEYDQLLKVARTKLA
Newman QRVSLELSNNFEASLSGWSADYPDPMAYLETMTTGSAQNNTDWGNKEYDQLLKVARTKLA
USA300_FPR3757 QRVSLELSNNFEASLSGWSADYPDPMAYLETMTTGSAQNNTDWGNKEYDQLLKVARTKLA
************************************************************
COL LQPNERYENLKKAEEMFLGDAPVAPIYQKGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDK
N315 LQPNERYENLKKAEEMFLGDAPVAPIYQKGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDK
NCTC8325 LQPNERYENLKKAEEMFLGDAPVAPIYQKGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDK
Newman LQPNERYENLKKAEEMFLGDAPVAPIYQKGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDK
USA300_FPR3757 LQPNERYENLKKAEEMFLGDAPVAPIYQKGVAHLTNPQVKGLIYHKFGPNNSLKHVYIDK
************************************************************
COL SIDKETGKKKK
N315 SIDKETGKKKK
NCTC8325 SIDKETGKKKK
Newman SIDKETGKKKK
USA300_FPR3757 SIDKETGKKKK
***********