PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN003055000
• symbol^?: ppiB
• synonym:
• description^?: peptidyl-prolyl cis-trans isomerase

  descriptions from strain specific annotations:

  • peptidyl-prolyl cis-trans isomerase
  • cyclophilin type peptidyl-prolyl cis-trans isomerase
  • cyclophilin-type peptidylprolyl cis- trans isomerase, putative
  • putative cyclophilin type peptidyl-prolylcis-trans isomerase
  • putative peptidyl-prolyl cis-trans isomerase
  • peptidyl-prolyl cis-trans isomerase, cyclophilin-type
  • peptidyl-prolyl cis-trans isomerase homologue
  • peptidyl-prolyl cis-trans isomerase-like protein
  • peptidyl-prolyl isomerase
  • peptidylprolyl isomerase domain and WD repeat-containing protein 1
• strand^?: +
• coordinates^?: 3444648..3445241
• synteny block^?: BlockID0021630
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0957
N315:
SA0815
NCTC8325:
SAOUHSC_00891
Newman:
NWMN_0824 (ppi)
USA300_FPR3757:
SAUSA300_0857
04-02981:
SA2981_0909
08BA02176:
C248_0953
11819-97:
MS7_0909
6850:
RSAU_000831
71193:
ST398NM01_0937
ECT-R 2:
ECTR2_810
ED133:
SAOV_0900
ED98:
SAAV_0915
HO 5096 0412:
SAEMRSA15_07840
JH1:
SaurJH1_0973
JH9:
SaurJH9_0954
JKD6008:
SAA6008_00907 (ppi)
JKD6159:
SAA6159_00813 (ppi)
LGA251:
SARLGA251_08720
M013:
M013TW_0873
MRSA252:
SAR0916
MSHR1132:
SAMSHR1132_08060
MSSA476:
SAS0824
Mu3:
SAHV_0949
Mu50:
SAV0954
MW2:
MW0836
RF122:
SAB0821
ST398:
SAPIG0937
T0131:
SAT0131_00986
TCH60:
HMPREF0772_12293 (ppi)
TW20:
SATW20_09540
USA300_TCH1516:
USA300HOU_0914 (prsA1)
VC40:
SAVC_03945

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRV
  N315            MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRV
  NCTC8325        MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRV
  Newman          MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRV
  USA300_FPR3757  MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRV
                  ************************************************************
  
  COL             INDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQM
  N315            INDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQM
  NCTC8325        INDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQM
  Newman          INDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQM
  USA300_FPR3757  INDFMIQGGDPTATGMGGESIYGGAFEDEFSLNAFNLYGALSMANSGPNTNGSQFFIVQM
                  ************************************************************
  
  COL             KEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP
  N315            KEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP
  NCTC8325        KEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP
  Newman          KEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP
  USA300_FPR3757  KEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGP
                  ***********:************************************************
  
  COL             QDKPLHDVVIESIDVEE
  N315            QDKPLHDVVIESIDVEE
  NCTC8325        QDKPLHDVVIESIDVEE
  Newman          QDKPLHDVVIESIDVEE
  USA300_FPR3757  QDKPLHDVVIESIDVEE
                  *****************