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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003040000
- symbol?: ndh2a
- synonym:
- description?: NADH dehydrogenase
- NADH dehydrogenase
- NADH dehydrogenase, FAD-containing subunit, putative
- putative pyridine nucleotide-disulfideoxidoreductase
- FAD-dependent pyridine nucleotide-disulfide oxidoreductase
- NADH dehydrogenase, putative
- NADH dehydrogenase family
- NADH dehydrogenase-like protein
- pyridine nucleotide-disulfide oxidoreductase family protein
- Pyridine oxidoreductase
- YumB
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3429280..3430488
- synteny block?: BlockID0021480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0896
08BA02176:
C248_0940
11819-97:
MS7_0896
6850:
RSAU_000818
71193:
ST398NM01_0924
ECT-R 2:
ECTR2_797
ED133:
SAOV_0887
ED98:
SAAV_0902
HO 5096 0412:
SAEMRSA15_07710
JH1:
SaurJH1_0960
JH9:
SaurJH9_0941
JKD6008:
SAA6008_00892
JKD6159:
SAA6159_00800
LGA251:
SARLGA251_08590
M013:
M013TW_0860
MRSA252:
SAR0903
MSHR1132:
SAMSHR1132_07930
MSSA476:
SAS0811
Mu3:
SAHV_0936
Mu50:
SAV0941
MW2:
MW0823
RF122:
SAB0807
ST398:
SAPIG0924
T0131:
SAT0131_00971 (kdpE)
TCH60:
HMPREF0772_12306 (ndh)
TW20:
SATW20_09410
USA300_TCH1516:
USA300HOU_0902
VC40:
SAVC_03880
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNY
N315 MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNY
NCTC8325 MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNY
Newman MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNY
USA300_FPR3757 MAQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNY
************************************************************
COL EDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFGIEG
N315 EDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFGIEG
NCTC8325 EDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFGIEG
Newman EDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFGIEG
USA300_FPR3757 EDVLYPVESVLKKDKVNFVQAEVTKIDRDAKKVETNQGIYDFDILVVALGFVSETFGIEG
************************************************************
COL MKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDR
N315 MKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDR
NCTC8325 MKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDR
Newman MKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDR
USA300_FPR3757 MKDHAFQIENVITARELSRHIEDKFANYAASKEKDDNDLSILVGGAGFTGVEFLGELTDR
************************************************************
COL IPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNE
N315 IPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNE
NCTC8325 IPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNE
Newman IPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNE
USA300_FPR3757 IPELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSYLEDRGVEFKIATPIVACNE
************************************************************
COL KGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVI
N315 KGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVI
NCTC8325 KGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVI
Newman KGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVI
USA300_FPR3757 KGFVVEVDGEKQQLNAGTSVWAAGVRGSKLMEESFEGVKRGRIVTKQDLTINGYDNIFVI
************************************************************
COL GDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHD
N315 GDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHD
NCTC8325 GDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHD
Newman GDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHD
USA300_FPR3757 GDCSAFIPAGEERPLPTTAQIAMQQGESVAKNIKRILNGESTEEFEYVDRGTVCSLGSHD
************************************************************
COL GVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF
N315 GVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF
NCTC8325 GVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF
Newman GVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF
USA300_FPR3757 GVGMVFGKPIAGKKAAFMKKVIDTRAVFKIGGIGLAFKKGKF
******************************************