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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003037000
- symbol?: ndh2b
- synonym:
- description?: NADH dehydrogenase family protein
- NADH dehydrogenase family protein
- NAD(P)/FAD-dependent oxidoreductase
- NADH dehydrogenase, FAD-containing subunit, putative
- putative pyridine nucleotide-disulfide oxidoreductase
- FAD-dependent pyridine nucleotide-disulfide oxidoreductase
- NADH dehydrogenase
- NADH dehydrogenase family
- pseudogene
- putative NADH dehydrogenase
- pyridine nucleotide-disulfide oxidoreductase family protein
- pyridine nucleotide-disulphide oxidoreductase
- Pyridine oxidoreductase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3426308..3427372
- synteny block?: BlockID0021450
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0893
08BA02176:
C248_0937
11819-97:
MS7_0893
6850:
RSAU_000815
71193:
ST398NM01_0921
ECT-R 2:
ECTR2_794
ED133:
SAOV_0884c
ED98:
SAAV_0899
HO 5096 0412:
SAEMRSA15_07680
JH1:
SaurJH1_0957
JH9:
SaurJH9_0938
JKD6008:
SAA6008_00889
JKD6159:
SAA6159_00797
LGA251:
SARLGA251_08560
M013:
M013TW_0857
MRSA252:
SAR0900
MSHR1132:
SAMSHR1132_07900
MSSA476:
SAS0808
Mu3:
SAHV_0933
Mu50:
SAV0938
MW2:
MW0820
RF122:
SAB0804c
ST398:
SAPIG0921
T0131:
SAT0131_00968
TCH60:
HMPREF0772_12309 (ndh2)
TW20:
SATW20_09380
USA300_TCH1516:
USA300HOU_0899
VC40:
SAVC_03865
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
N315 MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVR
NCTC8325 MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVR
Newman MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVR
USA300_FPR3757 MKNLVLLGGGYGNMRIMSRILTTSLPQDYTVTLVDRMPFHGLKPEFYALAAGTKSDKDVR
************************************************************
N315 MKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHS
NCTC8325 MKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHS
Newman MKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHS
USA300_FPR3757 MKFPNHPQVNTVYGEINDIDLDAQIVSVGNSKIDYDELIIGLGCEDKYHNVPGAEEYTHS
************************************************************
N315 IQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRN
NCTC8325 IQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRN
Newman IQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRN
USA300_FPR3757 IQTLSKARDTFHSISELPEGAKVGIVGAGLSGIELASELRESRSDLEIYLYDRGPRILRN
************************************************************
N315 FPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCDEPKDIDLVVWTAGIQPVEVVRN
NCTC8325 FPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCDEPKDIDLVVWTAGIQPVEVVRN
Newman FPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCDEPKDIDLVVWTAGIQPVEVVRN
USA300_FPR3757 FPEKLSKYVAKWFAKNNVTVVPNSNINKVEPGKIYNCDEPKDIDLVVWTAGIQPVEVVRN
************************************************************
N315 LPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPHAPSAQLAEVQGDQIADVLKKQWLN
NCTC8325 LPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPHAPSAQLAEVQGDQIADVLKKQWLN
Newman LPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPHAPSAQLAEVQGDQIADVLKKQWLN
USA300_FPR3757 LPIDINSNGRVIVNQYHQVPTYRNVYVVGDCADLPHAPSAQLAEVQGDQIADVLKKQWLN
************************************************************
N315 EPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG
NCTC8325 EPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG
Newman EPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG
USA300_FPR3757 EPLPDKMPELKVQGIVGSLGDKQGFAYIMDRTVTGRLASILKSGVLWLYKYHNG
******************************************************