Jump to navigation
Jump to search
NCBI: 10-JUN-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL0941
- pan locus tag?: SAUPAN003037000
- symbol: SACOL0941
- pan gene symbol?: ndh2b
- synonym:
- product:
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SACOL0941
- symbol: SACOL0941
- product:
- replicon: chromosome
- strand: -
- coordinates: 942970..944032
- length: 1063
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 3237737 NCBI
- RefSeq:
- BioCyc:
- MicrobesOnline: 912411 MicrobesOnline
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021ATGAAAAACTTAGTTTTGTTAGGCGGCGGATATGGTAATATGCGTATCATGTCACGCATT
TTAACTACTTCTTTACCACAAGATTATACAGTCACATTAGTTGATCGTATGCCATTTCAT
GGATTGAAACCAGAATTTTATGCTTTAGCTGCGGGCACGAAATCAGATAAAGATGTTCGT
ATGAAATTCCCTAATCATCCACAAGTGAATACAGTTTATGGTGAAATTAACGACATAGAT
TTAGATGCTCAAATTGTCTCAGTCGGTAATTCTAAAATTGATTATGATGAGCTAATCATT
GGTTTAGGATGTGAAGATAAATATCATAACGTTCCAGGAGCCGAAGAATATACACATAGT
ATTCAAACACTCTCAAAGGCTCGGGATACTTTCCATAGTATTAGTGAACTACCAGAAGGT
GCTAAAGTCGGTATCGTTGGTGCTGGATTAAGCGGCATAGAACTTGCCAGCGAATTAAGA
GAAAGTAGATCAGACTTGGAAATATATCTTTATGACCGTGGGCCGCGAATTTTAAGAAAT
TTTCCAGAAAAATTAAGTAAGTATGTTGCGAAATGGTTCGCCAAAAATAATGTTACCGTT
GTTCCAAATTCAAATATTAATAAAGTTGAACCTGGTAAAATATATAACTGTGATGAACCT
AAAGATATTGATTTAGTTGTATGGACAGCAGGAATTCAACCTGTTGAAGTTGTTCGTAAC
TTGCCGATTGATATAAATAGTAATGGACGCGTGATAGTTAACCAGTATCATCAAGTACCA
ACATATCGTAACGTCTATGTAGTTGGTGATTGTGCTGATTTACCACATGCGCCAAGTGCT
CAGTTAGCCGAAGTTCAAGGTGATCAAATTGCCGATGTGCTTAAAAAGCAATGGCTAAAT
GAACCATTACCTGACAAAATGCCGGAACTAAAGGTACAAGGTATCGTTGGGTCATTAGGA
GATAAGCAAGGTTTTGCATATATCATGGACCGCACTGTAACAGGACGACTCGCTTCTATT
TTAAAATCCGGCGTACTTTGGTTATATAAATATCATAATGGTT60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1063
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL0941
- symbol: SACOL0941
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for N315, NCTC8325, Newman, USA300_FPR3757
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- LocateP:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]