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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002899000
- symbol?: sufB
- synonym:
- description?: Fe-S cluster assembly protein SufB
- Fe-S cluster assembly protein SufB
- FeS assembly protein SufB
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter-associated protein
- ABC transporter ATP-binding protein
- Iron-sulfur cluster assembly protein SufB
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3343571..3344977
- synteny block?: BlockID0020650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0801 (sufB)
08BA02176:
C248_0915
11819-97:
MS7_0873 (sufB)
6850:
RSAU_000796 (sufB)
71193:
ST398NM01_0901
ECT-R 2:
ECTR2_773 (sufB)
ED133:
SAOV_0863
ED98:
SAAV_0817 (sufB)
HO 5096 0412:
SAEMRSA15_07480
JH1:
SaurJH1_0863
JH9:
SaurJH9_0847
JKD6008:
SAA6008_00868 (sufB)
JKD6159:
SAA6159_00777 (sufB)
LGA251:
SARLGA251_07750
M013:
M013TW_0838
MRSA252:
SAR0880
MSHR1132:
SAMSHR1132_07700
MSSA476:
SAS0788
Mu3:
SAHV_0842
Mu50:
SAV0846
MW2:
MW0799
RF122:
SAB0778
ST398:
SAPIG0901 (sufB)
T0131:
SAT0131_00945
TCH60:
HMPREF0772_12330 (sufB)
TW20:
SATW20_09180
USA300_TCH1516:
USA300HOU_0875
VC40:
SAVC_03765
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
N315 MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
NCTC8325 MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
Newman MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
USA300_FPR3757 MAKKAPDVGDYKYGFHDDDVSIFRSERGLTENIVREISNMKNEPEWMLDFRLKSLKLFYK
************************************************************
COL MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
N315 MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
NCTC8325 MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
Newman MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
USA300_FPR3757 MPMPQWGGDLSELNFDDITYYVKPSEQAERSWDEVPEEIKRTFDKLGIPEAEQKYLAGVS
************************************************************
COL AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
N315 AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
NCTC8325 AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
Newman AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
USA300_FPR3757 AQYESEVVYHNMEKELEEKGIIFKDTDSALQENEELFKKYFASVVPAADNKFAALNSAVW
************************************************************
COL SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
N315 SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
NCTC8325 SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
Newman SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
USA300_FPR3757 SGGSFIYVPKNIKLDTPLQAYFRINSENMGQFERTLIIADEGASVHYVEGCTAPVYTTSS
************************************************************
COL LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
N315 LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
NCTC8325 LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
Newman LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
USA300_FPR3757 LHSAVVEIIVHKDAHVRYTTIQNWANNVYNLVTKRTFVYENGNMEWVDGNLGSKLTMKYP
************************************************************
COL NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
N315 NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
NCTC8325 NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
Newman NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
USA300_FPR3757 NCVLLGEGAKGSTLSIAFAGKGQVQDAGAKMIHKAPNTSSTIVSKSISKNGGKVIYRGIV
************************************************************
COL HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
N315 HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
NCTC8325 HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
Newman HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
USA300_FPR3757 HFGRKAKGARSNIECDTLILDNESTSDTIPYNEVFNDQISLEHEAKVSKVSEEQLFYLMS
************************************************************
COL RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
N315 RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
NCTC8325 RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
Newman RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
USA300_FPR3757 RGISEEEATEMIVMGFIEPFTKELPMEYAVEMNRLIKFEMEGSIG
*********************************************