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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002706000
- symbol?: gapA
- synonym:
- description?: aldehyde dehydrogenase
- aldehyde dehydrogenase
- glyceraldehyde 3-phosphate dehydrogenase
- glyceraldehyde 3-phosphate dehydrogenase 1
- glyceraldehyde-3-phosphate dehydrogenase, type I
- type I glyceraldehyde-3-phosphate dehydrogenase
- NAD-dependent glyceraldehyde-3-phosphate dehydrogenase
- glyceraldehyde-3-phosphate dehydrogenase (phosphorylating)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3194883..3195893
- synteny block?: BlockID0019380
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0750 (gap)
08BA02176:
C248_0863 (gap1)
11819-97:
MS7_0823
6850:
RSAU_000750 (gapA1)
71193:
ST398NM01_0851
ECT-R 2:
ECTR2_723 (gap)
ED133:
SAOV_0814
ED98:
SAAV_0738 (gapA1)
HO 5096 0412:
SAEMRSA15_06990 (gap1)
JH1:
SaurJH1_0813
JH9:
SaurJH9_0797
JKD6008:
SAA6008_00787 (gap)
JKD6159:
SAA6159_00729 (gap)
LGA251:
SARLGA251_07060 (gap1)
M013:
M013TW_0763
MRSA252:
SAR0828 (gap1)
MSHR1132:
SAMSHR1132_07180
MSSA476:
SAS0738
Mu3:
SAHV_0769 (gap)
Mu50:
SAV0772 (gap)
MW2:
MW0734 (gap)
RF122:
SAB0728 (gap)
ST398:
SAPIG0851 (gap)
T0131:
SAT0131_00844
TCH60:
HMPREF0772_12406 (gap2)
TW20:
SATW20_08470 (gap1)
USA300_TCH1516:
USA300HOU_0802 (gap)
VC40:
SAVC_03505
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV
N315 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV
NCTC8325 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV
Newman MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV
USA300_FPR3757 MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEV
************************************************************
COL VDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS
N315 VDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS
NCTC8325 VDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS
Newman VDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS
USA300_FPR3757 VDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLIS
************************************************************
COL APATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAY
N315 APATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAY
NCTC8325 APATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAY
Newman APATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAY
USA300_FPR3757 APATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAY
************************************************************
COL TGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG
N315 TGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG
NCTC8325 TGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG
Newman TGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG
USA300_FPR3757 TGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATG
************************************************************
COL SLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVM
N315 SLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVM
NCTC8325 SLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVM
Newman SLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVM
USA300_FPR3757 SLTELTVVLEKQDVTVEQVNEAMKNASNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVM
************************************************************
COL SVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
N315 SVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
NCTC8325 SVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
Newman SVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
USA300_FPR3757 SVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
************************************