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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002692000
- symbol?: whiA
- synonym:
- description?: sporulation regulator WhiA
- sporulation regulator WhiA
- DNA-binding protein WhiA
- putative sporulation transcription regulator whiA
- cytoplasmic hypothetical protein
- sporulation Regulator WhiA C terminal domain protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3185802..3186746
- synteny block?: BlockID0019240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0745
08BA02176:
C248_0855
11819-97:
MS7_0817
6850:
RSAU_000742
71193:
ST398NM01_0844
ECT-R 2:
ECTR2_717
ED133:
SAOV_0805
ED98:
SAAV_0731
HO 5096 0412:
SAEMRSA15_06930
JH1:
SaurJH1_0808
JH9:
SaurJH9_0792
JKD6008:
SAA6008_00782 (whiA)
JKD6159:
SAA6159_00724 (whiA)
LGA251:
SARLGA251_07000
M013:
M013TW_0756
MRSA252:
SAR0822
MSHR1132:
SAMSHR1132_07120
MSSA476:
SAS0732
Mu3:
SAHV_0764
Mu50:
SAV0767
MW2:
MW0729
RF122:
SAB0721
ST398:
SAPIG0844
T0131:
SAT0131_00839
TCH60:
HMPREF0772_12413
TW20:
SATW20_08420
USA300_TCH1516:
USA300HOU_0796
VC40:
SAVC_03480
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
N315 MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
NCTC8325 MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
Newman MSFASEMKNELTRIDVDEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
USA300_FPR3757 MSFASEMKNELTRIDVEEMNAKAELSALIRMNGALSLSNQQFVINVQTENATTARRIYSL
****************:*******************************************
COL IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
N315 IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
NCTC8325 IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
Newman IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
USA300_FPR3757 IKRVFNVEVEILVRKKMKLKKNNIYICRTKMKAKEILDELGILKDGIFTHEIDHSMIQDD
************************************************************
COL EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
N315 EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
NCTC8325 EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
Newman EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
USA300_FPR3757 EMRRSYLRGAFLAGGSVNNPETSSYHLEIFSQNESHAEGLTKLMNSYELNAKHLERKKGS
************************************************************
COL ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
N315 ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
NCTC8325 ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
Newman ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
USA300_FPR3757 ITYLKEAEKISDFLSLIGGYQALLKFEDVRIVRDMRNSVNRLVNCETANLNKTVSAAMKQ
************************************************************
COL VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
N315 VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
NCTC8325 VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
Newman VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
USA300_FPR3757 VESIKLIDKEIGIENLPDRLREIARIRVEHQEISLKELGEMVSTGPISKSGVNHRLRKLN
************************************************************
COL DLADKIRNGEQIEL
N315 DLADKIRNGEQIEL
NCTC8325 DLADKIRNGEQIEL
Newman DLADKIRNGEQIEL
USA300_FPR3757 DLADKIRNGEQIEL
**************