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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002582000
- symbol?: fruR
- synonym:
- description?: DeoR/GlpR transcriptional regulator
- DeoR/GlpR transcriptional regulator
- DeoR family transcriptional regulator
- fructose operon transcriptional regulator
- transcriptional repressor of fructose operon, putative
- bacterial regulatory s, deoR family protein
- DeoR family regulatory protein
- deoR-like helix-turn-helix domain protein
- DeoR ramily regulatory protein
- fructose operon transcriptional repressor
- fructose repressor
- lactose PTS family porter repressor
- transcriptional repressor of fructose operon
- Transcriptional repressor of the fructose operon, DeoR family
- transcription repressor of fructose operon
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3094054..3094821
- synteny block?: BlockID0018180
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0675 (deoR)
08BA02176:
C248_0782
11819-97:
MS7_0749
6850:
RSAU_000673
71193:
ST398NM01_0775
ECT-R 2:
ECTR2_649
ED133:
SAOV_0732
ED98:
SAAV_0660
HO 5096 0412:
SAEMRSA15_06240
JH1:
SaurJH1_0738
JH9:
SaurJH9_0722
JKD6008:
SAA6008_00714
JKD6159:
SAA6159_00653
LGA251:
SARLGA251_06310
M013:
M013TW_0684
MRSA252:
SAR0751
MSHR1132:
SAMSHR1132_06430
MSSA476:
SAS0663
Mu3:
SAHV_0695
Mu50:
SAV0698
MW2:
MW0660
RF122:
SAB0647
ST398:
SAPIG0775
T0131:
SAT0131_00768 (sep)
TCH60:
HMPREF0772_12489 (lacR2)
TW20:
SATW20_07730
USA300_TCH1516:
USA300HOU_0721
VC40:
SAVC_03125
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MMIITEKRHELILEELLHKDFLTLQELIDRTGCSASTIRRDLSKLQQLGKLQRVHGGAML
N315 -MIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSKLQQLGKLQRVHGGAML
NCTC8325 MMIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSKLQQLGKLQRVHGGAML
Newman -MIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSKLQQLGKLQRVHGGAML
USA300_FPR3757 -MIITEKRHELILEELSHKDFLTLQELIDRTGCSASTIRRDLSKLQQLGKLQRVHGGAML
*************** *******************************************
COL KENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDAGSSTLELIKYIQAKDIIV
N315 KENRMIEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDAGSSTLELIKYIQAKDIIV
NCTC8325 KENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDAGSSTLELIKYIQAKDIIV
Newman KENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDAGSSTLELIKYIQAKDIIV
USA300_FPR3757 KENRMVEANLTEKLATNLDEKKMIAKIAANQINDNECLFIDAGSSTLELIKYIQAKDIIV
*****:******************************************************
COL VTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEILRRYCFDKAFIGMNGLDIEL
N315 VTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEILRRYCFDKAFIGMNGLDIEL
NCTC8325 VTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEILRRYCFDKAFIGMNGLDIEL
Newman VTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEILRRYCFDKAFIGMNGLDIEL
USA300_FPR3757 VTNGLTHVEALLKKGIKTIMLGGQVKENTLATIGSSAMEILRRYCFDKAFIGMNGLDIEL
************************************************************
COL GLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFARVPLLESTTIITSEKALNQESL
N315 GLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFARVPLLESTTIITSEKALNQESL
NCTC8325 GLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFARVPLLESTTIITSEKALNQESL
Newman GLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFARVPLLESTTIITSEKALNQESL
USA300_FPR3757 GLTTPDEQEALVKQTAMSLANQSFVLIDHSKFNKVYFARVPLLESTTIITSEKALNQESL
************************************************************
COL KEYQQKYHFIGGTL
N315 KEYQQKYHFIGGTL
NCTC8325 KEYQQKYHFIGGTL
Newman KEYQQKYHFIGGTL
USA300_FPR3757 KEYQQKYHFIGGTL
**************