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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002553000
- symbol?: —
- synonym:
- description?: DUF402 domain-containing protein
- DUF402 domain-containing protein
- putative DUF402-containing protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3066583..3067239
- synteny block?: BlockID0017890
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0648
08BA02176:
C248_0756
11819-97:
MS7_0722
6850:
RSAU_000647
71193:
ST398NM01_0749
ECT-R 2:
ECTR2_623
ED133:
SAOV_0706
ED98:
SAAV_0634
HO 5096 0412:
SAEMRSA15_05970
JH1:
SaurJH1_0711
JH9:
SaurJH9_0695
JKD6008:
SAA6008_00688
JKD6159:
SAA6159_00625
LGA251:
SARLGA251_06040
M013:
M013TW_0658
MRSA252:
SAR0682
MSHR1132:
SAMSHR1132_06170
MSSA476:
SAS0636
Mu3:
SAHV_0668
Mu50:
SAV0671
MW2:
MW0633
RF122:
SAB0620
ST398:
SAPIG0749
T0131:
SAT0131_00742
TCH60:
HMPREF0772_12517
TW20:
SATW20_07460
USA300_TCH1516:
USA300HOU_0693
VC40:
SAVC_02985
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
N315 MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
NCTC8325 MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
Newman MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
USA300_FPR3757 MKVKYIDKRHWRRLIDREYTEVKVNNNRFKGIIGLVTMKKVRDPLEVTVVGQNIIVADDN
************************************************************
COL YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
N315 YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
NCTC8325 YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
Newman YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNACTVDLCLDVLALPSGEY
USA300_FPR3757 YKWLQILPEKKRYSITVMFDNKGNPLEYYFDINIKNITQKGNARTVDLCLDVLALPSGEY
******************************************* ****************
COL ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
N315 ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
NCTC8325 ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
Newman ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
USA300_FPR3757 ELVDEDDLMFALESEQITKKQFHEAYMIAHQIMAELENDFKGFQKKIMYCFNKINAKAQK
************************************************************
COL NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
N315 NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
NCTC8325 NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
Newman NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
USA300_FPR3757 NHQKPQNKTNIEKSKQIKPKQYNQTKNHQQQKKN
**********************************