PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002353000
• symbol^?: vraB
• synonym:
• description^?: acetyl-CoA acetyltransferase

  descriptions from strain specific annotations:

  • acetyl-CoA acetyltransferase
  • acetyl-CoA c-acetyltransferase
  • thiolase family protein
  • acetyl-CoA acetyltransferase, putative
  • acetyl-CoA C-acetyltransferase VraB
  • 3-ketoacyl-CoA thiolase
  • acetyl-CoA acetyltransferases family protein
  • acetyl-CoA C-acetyltransferase family protein
  • ketoacyl-CoA thiolase
  • Putative acetyl-CoA C-acetyltransferase vraB
  • putative ketoacyl-CoA thiolase
• strand^?: +
• coordinates^?: 2892999..2894150
• synteny block^?: BlockID0016520
• occurrence^?: in 100% of 34 strains

⊟Orthologs

COL:
SACOL0622 (atoB)
N315:
SA0534 (vraB)
NCTC8325:
SAOUHSC_00558
Newman:
NWMN_0539 (vraB)
USA300_FPR3757:
SAUSA300_0560 (vraB)
JSNZ:
JSNZ_000533
04-02981:
SA2981_0553 (vraB)
08BA02176:
C248_0651
11819-97:
MS7_0565
6850:
RSAU_000529 (vraB)
71193:
ST398NM01_0650
ECT-R 2:
ECTR2_529
ED133:
SAOV_0610
ED98:
SAAV_0538 (atoB)
HO 5096 0412:
SAEMRSA15_05030
JH1:
SaurJH1_0613
JH9:
SaurJH9_0599
JKD6008:
SAA6008_00583 (vraB)
JKD6159:
SAA6159_00529 (vraB)
LGA251:
SARLGA251_05110
M013:
M013TW_0563
MRSA252:
SAR0581
MSHR1132:
SAMSHR1132_05190
MSSA476:
SAS0534
Mu3:
SAHV_0574 (vraB)
Mu50:
SAV0576 (vraB)
MW2:
MW0531 (vraB)
RF122:
SAB0526
ST398:
SAPIG0650
T0131:
SAT0131_00636
TCH60:
HMPREF0772_12613 (atoB2)
TW20:
SATW20_06450
USA300_TCH1516:
USA300HOU_0569 (vraB)
VC40:
SAVC_02465

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNG
  N315            MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNG
  NCTC8325        MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNG
  Newman          MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNG
  USA300_FPR3757  MNQAVIVAAKRTAFGKYGGTLKHLEPEQLLKPLFQHFKEKYPEVISKIDDVVLGNVVGNG
                  ************************************************************
  
  COL             GNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP
  N315            GNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP
  NCTC8325        GNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP
  Newman          GNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP
  USA300_FPR3757  GNIARKALLEAGLKDSIPGVTIDRQCGSGLESVQYACRMIQAGAGKVYIAGGVESTSRAP
                  ************************************************************
  
  COL             WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRGLQDEFAYRSHQL
  N315            WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQL
  NCTC8325        WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQL
  Newman          WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQL
  USA300_FPR3757  WKIKRPHSVYETALPEFYERASFAPEMSDPSMIQGAENVAKMYDVSRELQDEFAYRSHQL
                  *********************************************** ************
  
  COL             TAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDNFGRFKPVIKGGTVTAANSCMKN
  N315            TAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDNFGRFKPVIKGGTVTAANSCMKN
  NCTC8325        TAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDNFGRFKPVIKGGTVTAANSCMKN
  Newman          TAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDNFGRFKPVIKGGTVTAANSCMKN
  USA300_FPR3757  TAENVKNGNISQEILPITVKGEIFNTDESLKSHIPKDNFGRFKPVIKGGTVTAANSCMKN
                  ************************************************************
  
  COL             DGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENI
  N315            DGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENI
  NCTC8325        DGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENI
  Newman          DGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENI
  USA300_FPR3757  DGAVLLLIMEKDMAYELGFEHGLLFKDGVTVGVDSNFPGIGPVPAISNLLKRNQLTIENI
                  ************************************************************
  
  COL             EVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRLFYMFDKETM
  N315            EVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRLFYMFDKETM
  NCTC8325        EVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRLFYMFDKETM
  Newman          EVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRLFYMFDKETM
  USA300_FPR3757  EVIEINEAFSAQVVACQQALNISNTQLNIWGGALASGHPYGASGAQLVTRLFYMFDKETM
                  ************************************************************
  
  COL             IASMGIGGGLGNAALFTRF
  N315            IASMGIGGGLGNAALFTRF
  NCTC8325        IASMGIGGGLGNAALFTRF
  Newman          IASMGIGGGLGNAALFTRF
  USA300_FPR3757  IASMGIGGGLGNAALFTRF
                  *******************