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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002346000
- symbol?: nagB
- synonym:
- description?: glucosamine-6-phosphate deaminase
- glucosamine-6-phosphate deaminase
- glucosamine-6-phosphate isomerase
- glucosamine-6-phosphate deaminase 1 (Glucosamine-6-phosphate isomerase 1) (GNPDA 1) (GlcN6P deaminase 1)
- glucosamine/galactosamine-6-phosphate isomerase
- glucosamine/galactosamine-6-phosphate isomerase, NagB
- putative glucosamine-6-phosphate isomerase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2885892..2886650
- synteny block?: BlockID0016450
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0546 (nagB)
08BA02176:
C248_0644
11819-97:
MS7_0559 (nagB)
6850:
RSAU_000523 (nagB)
71193:
ST398NM01_0644
ECT-R 2:
ECTR2_523
ED133:
SAOV_0604
ED98:
SAAV_0532 (nagB)
HO 5096 0412:
SAEMRSA15_04960
JH1:
SaurJH1_0606
JH9:
SaurJH9_0592
JKD6008:
SAA6008_00577 (nagB)
JKD6159:
SAA6159_00523 (nagB)
LGA251:
SARLGA251_05050
M013:
M013TW_0557
MRSA252:
SAR0573
MSHR1132:
SAMSHR1132_05130
MSSA476:
SAS0527
Mu3:
SAHV_0567 (nagB)
Mu50:
SAV0569 (nagB)
MW2:
MW0524 (nagB)
RF122:
SAB0519
ST398:
SAPIG0644
T0131:
SAT0131_00630
TCH60:
HMPREF0772_12619 (nagB)
TW20:
SATW20_06390
USA300_TCH1516:
USA300HOU_0563 (nagB)
VC40:
SAVC_02435
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
N315 MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
NCTC8325 MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
Newman MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
USA300_FPR3757 MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDN
************************************************************
COL VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
N315 VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
NCTC8325 VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
Newman VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
USA300_FPR3757 VSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDV
************************************************************
COL LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
N315 LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
NCTC8325 LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
Newman LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
USA300_FPR3757 LEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQA
************************************************************
COL ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
N315 ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
NCTC8325 ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
Newman ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
USA300_FPR3757 ISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACP
************************************************************
COL KNVAKIHVDEMD
N315 KNVAKIHVDEMD
NCTC8325 KNVAKIHVDEMD
Newman KNVAKIHVDEMD
USA300_FPR3757 KNVAKIHVDEMD
************