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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002345000
- symbol?: —
- synonym:
- description?: YojF family protein
- YojF family protein
- putative DUF1806 family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2885247..2885606
- synteny block?: BlockID0016440
- occurrence?: in 100% of 34 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0545
08BA02176:
C248_0643
11819-97:
MS7_0558
6850:
RSAU_000522
71193:
ST398NM01_0643
ECT-R 2:
ECTR2_522
ED133:
SAOV_0603c
ED98:
SAAV_0531
HO 5096 0412:
SAEMRSA15_04950
JH1:
SaurJH1_0605
JH9:
SaurJH9_0591
JKD6008:
SAA6008_00576
JKD6159:
SAA6159_00522
LGA251:
SARLGA251_05040
M013:
M013TW_0556
MRSA252:
SAR0572
MSHR1132:
SAMSHR1132_05120
MSSA476:
SAS0526
Mu3:
SAHV_0566
Mu50:
SAV0568
MW2:
MW0523
RF122:
SAB0518c
ST398:
SAPIG0643
T0131:
SAT0131_00629
TCH60:
HMPREF0772_12620
TW20:
SATW20_06380
USA300_TCH1516:
USA300HOU_0562
VC40:
SAVC_02430
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 | |
| JSNZ |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQITYTHA
N315 ---MEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQVTYTHA
NCTC8325 --MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQITYTHA
Newman MNVLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQITYTHA
USA300_FPR3757 --MLEPIKEQEVIDLLASFEHKPVYLHVETTNGAYANHFDQRVFNAGTFLRNIQITYTHA
:**************************************************:*****
COL QLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPF
N315 QLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPF
NCTC8325 QLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPF
Newman QLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPF
USA300_FPR3757 QLKGGNKEPYRIGLKLSNGGWVYVQGLTHFEVNEHDEFLIAGFNYEGQLAAALQISERPF
************************************************************
COL NL
N315 NL
NCTC8325 NL
Newman NL
USA300_FPR3757 NL
**