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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002310000
- symbol?: rplJ
- synonym:
- description?: 50S ribosomal protein L10
- 50S ribosomal protein L10
- 50S ribosomalprotein L10p (P0)
- ribosomal protein L10 family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2825776..2826276
- synteny block?: BlockID0016090
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0516 (rplJ)
08BA02176:
C248_0614 (rplJ)
11819-97:
MS7_0529 (rplJ)
6850:
RSAU_000491 (rplJ)
71193:
ST398NM01_0614
ECT-R 2:
ECTR2_493
ED133:
SAOV_0574 (rplJ)
ED98:
SAAV_0502 (rplJ)
HO 5096 0412:
SAEMRSA15_04660 (rplJ)
JH1:
SaurJH1_0576 (rplJ)
JH9:
SaurJH9_0562 (rplJ)
JKD6008:
SAA6008_00545 (rplJ)
JKD6159:
SAA6159_00492 (rplJ)
LGA251:
SARLGA251_04750 (rplJ)
M013:
M013TW_0524
MRSA252:
SAR0544 (rplJ)
MSHR1132:
SAMSHR1132_04830
MSSA476:
SAS0497 (rplJ)
Mu3:
SAHV_0537 (rplJ)
Mu50:
SAV0539 (rplJ)
MW2:
MW0494 (rplJ)
RF122:
SAB0490 (rplJ)
ST398:
SAPIG0614
T0131:
SAT0131_00592
TCH60:
HMPREF0772_12650 (rplJ)
TW20:
SATW20_06090 (rplJ)
USA300_TCH1516:
USA300HOU_0533 (rplJ)
VC40:
SAVC_02285 (rplJ)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMV
N315 MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMV
NCTC8325 MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMV
Newman MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMV
USA300_FPR3757 MSAIIEAKKQLVDEIAEVLSNSVSTVIVDYRGLTVAEVTDLRSQLREAGVEYKVYKNTMV
************************************************************
COL RRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKDHEALEIKSGVMEGNVITA
N315 RRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKDHEALEIKSGVMEGNVITA
NCTC8325 RRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKDHEALEIKSGVMEGNVITA
Newman RRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKDHEALEIKSGVMEGNVITA
USA300_FPR3757 RRAAEKAGIEGLDEFLTGPTAIATSSEDAVAAAKVISGFAKDHEALEIKSGVMEGNVITA
************************************************************
COL EEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE
N315 EEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE
NCTC8325 EEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE
Newman EEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE
USA300_FPR3757 EEVKTVGSLPSHDGLVSMLLSVLQAPVRNFAYAVKAIGEQKEENAE
**********************************************