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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002287000
- symbol?: ctsR
- synonym:
- description?: transcriptional regulator CtsR
- transcriptional regulator CtsR
- CtsR family transcriptional regulator
- class III stress genes transcriptional repressor
- DNA-binding protein
- putative DNA-binding protein
- transcriptional repressor of stress genes
- transcription repressor of class III stress genes homologue
- transcription repressor of class III stress genes-like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2808630..2809100
- synteny block?: BlockID0015860
- occurrence?: in 100% of 34 strains
ctsR : class three stress gene regulon transcriptional repressor and protein-arginine kinase inhibitor CtsR [1]
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0497 (ctsR)
08BA02176:
C248_0594
11819-97:
MS7_0511 (ctsR)
6850:
RSAU_000473 (ctsR)
71193:
ST398NM01_0597
ECT-R 2:
ECTR2_475
ED133:
SAOV_0557
ED98:
SAAV_0483 (ctsR)
HO 5096 0412:
SAEMRSA15_04480
JH1:
SaurJH1_0558
JH9:
SaurJH9_0544
JKD6008:
SAA6008_00528 (ctsR)
JKD6159:
SAA6159_00475 (ctsR)
JSNZ:
JSNZ_000479
LGA251:
SARLGA251_04570 (ctsR)
M013:
M013TW_0506
MRSA252:
SAR0525
MSHR1132:
SAMSHR1132_04660
MSSA476:
SAS0479
Mu3:
SAHV_0519 (ctsR)
Mu50:
SAV0522 (ctsR)
MW2:
MW0477 (ctsR)
RF122:
SAB0472
ST398:
SAPIG0597
T0131:
SAT0131_00572
TCH60:
HMPREF0772_12669 (ctsR)
TW20:
SATW20_05910 (ctsR)
USA300_TCH1516:
USA300HOU_0515 (ctsR)
VC40:
SAVC_02195
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
N315 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
NCTC8325 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
Newman MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
USA300_FPR3757 MHNMSDIIEQYIKRLFEESNEDVVEIQRANIAQRFDCVPSQLNYVIKTRFTNEHGYEIES
************************************************************
COL KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
N315 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
NCTC8325 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
Newman KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
USA300_FPR3757 KRGGGGYIRITKIENKDATGYINHLLQLIGPSISQQQAYYIIDGLLDKMLINEREAKMIQ
************************************************************
COL AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
N315 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
NCTC8325 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
Newman AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
USA300_FPR3757 AVIDRETLSMDMVSRDIIRANILKRLLPVINYY
*********************************
- ↑ Kai Lu, Bingnan Luo, Xuan Tao, Yongbo Luo, Mingjun Ao, Bin Zheng, Xiang Xu, Xiaoyan Ma, Jingling Niu, Huinan Li, Yanxuan Xie, Zhennan Zhao, Peng Zheng, Guanbo Wang, Song Gao, Chao Wang, Wei Xia, Zhaoming Su, Zong-Wan Mao
Complex structure and activation mechanism of arginine kinase McsB by McsA.
Nat Chem Biol: 2024;
[PubMed:39232187] [WorldCat.org] [DOI] (I a)Arnaud Chastanet, Juliette Fert, Tarek Msadek
Comparative genomics reveal novel heat shock regulatory mechanisms in Staphylococcus aureus and other Gram-positive bacteria.
Mol Microbiol: 2003, 47(4);1061-73
[PubMed:12581359] [WorldCat.org] [DOI] (P p)