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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002284000
- symbol?: pdxT
- synonym:
- description?: glutamine amidotransferase subunit PdxT
- glutamine amidotransferase subunit PdxT
- pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
- glutamine amidotransferase family protein
- pyridoxine biosynthesis amidotransferase
- Pyridoxine biosynthesis glutamineamidotransferase, glutaminase subunit
- glutamine amidotransferase subunit PdxT (Glutamineamidotransferase glutaminase subunit pdxT)
- pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
- SNO glutamine amidotransferase family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2806487..2807047
- synteny block?: BlockID0015830
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0495
08BA02176:
C248_0591
11819-97:
MS7_0509 (pdxT)
6850:
RSAU_000471
71193:
ST398NM01_0595
ECT-R 2:
ECTR2_473
ED133:
SAOV_0555
ED98:
SAAV_0481
HO 5096 0412:
SAEMRSA15_04460
JH1:
SaurJH1_0556
JH9:
SaurJH9_0542
JKD6008:
SAA6008_00526
JKD6159:
SAA6159_00473
LGA251:
SARLGA251_04540
M013:
M013TW_0504
MRSA252:
SAR0523
MSHR1132:
SAMSHR1132_04640
MSSA476:
SAS0477
Mu3:
SAHV_0517
Mu50:
SAV0520
MW2:
MW0475
RF122:
SAB0470
ST398:
SAPIG0595
T0131:
SAT0131_00569
TCH60:
HMPREF0772_12671
TW20:
SATW20_05880
USA300_TCH1516:
USA300HOU_0512
VC40:
SAVC_02185
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILPGGESTTLRRLMNLYGF
N315 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILPGGESTTLRRLMNLYGF
NCTC8325 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILPGGESTTLRRLMNLYGF
Newman MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILPGGESTTLRRLMNLYGF
USA300_FPR3757 MKIGVLALQGAVREHIRHIELSGHEGIAVKKVEQLEEIEGLILPGGESTTLRRLMNLYGF
************************************************************
COL KEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRNSFGRQVDSFETELDIKGI
N315 KEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRNSFGRQVDSFETELDIKGI
NCTC8325 KEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRNSFGRQVDSFETELDIKGI
Newman KEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRNSFGRQVDSFETELDIKGI
USA300_FPR3757 KEALQNSTLPMFGTCAGLIVLAQDIVGEEGYLNKLNITVQRNSFGRQVDSFETELDIKGI
************************************************************
COL ATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYLGVSFHPELTDDYRVTDYFIN
N315 ATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYLGVSFHPELTDDYRVTDYFIN
NCTC8325 ATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYLGVSFHPELTDDYRVTDYFIN
Newman ATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYLGVSFHPELTDDYRVTDYFIN
USA300_FPR3757 ATDIEGVFIRAPHIEKVGQGVDILCKVNEKIVAVQQGKYLGVSFHPELTDDYRVTDYFIN
************************************************************
COL HIVKKA
N315 HIVKKA
NCTC8325 HIVKKA
Newman HIVKKA
USA300_FPR3757 HIVKKA
******