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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002245000
- symbol?: —
- synonym:
- description?: polysaccharide biosynthesis protein
- polysaccharide biosynthesis protein
- stage V sporulation protein B
- low temperature requirement B protein
- export protein for polysaccharides and teichoic acids
- membrane spanning protein
- MOP superfamily PST family polysaccharide transporter
- mviN-like family protein
- polysaccharide biosynthesis family protein
- putative polysaccharide biosynthesis protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2753027..2754556
- synteny block?: BlockID0015440
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0479
08BA02176:
C248_0560
11819-97:
MS7_0481
6850:
RSAU_000443
71193:
ST398NM01_0570
ECT-R 2:
ECTR2_444
ED133:
SAOV_0526
ED98:
SAAV_0451
HO 5096 0412:
SAEMRSA15_04300
JH1:
SaurJH1_0539
JH9:
SaurJH9_0526
JKD6008:
SAA6008_00509
JKD6159:
SAA6159_00455
LGA251:
SARLGA251_04380
M013:
M013TW_0476
MRSA252:
SAR0505
MSHR1132:
SAMSHR1132_04480
MSSA476:
SAS0461
Mu3:
SAHV_0501
Mu50:
SAV0504
MW2:
MW0459
RF122:
SAB0453
ST398:
SAPIG0570
T0131:
SAT0131_00550
TCH60:
HMPREF0772_10015
TW20:
SATW20_05720
USA300_TCH1516:
USA300HOU_0498
VC40:
SAVC_02105
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNA
N315 MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNA
NCTC8325 MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNA
Newman MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNA
USA300_FPR3757 MKHKEAFNGVVVLTAALIVIKILSAVYRIPYQNILGDTGLYAYQQVYPIVALGMILSMNA
************************************************************
COL IPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAHMMGDGHLTPMIQAAS
N315 IPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAHMMGDSHLTPMIQAAS
NCTC8325 IPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAHMMGDGHLTPMIQAAS
Newman IPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAHMMGDGHLTPMIQAAS
USA300_FPR3757 IPSAITQNIGKYHSDEAYAKAVAYIQLVGILLFIAIFVFANNIAHMMGDGHLTPMIQAAS
*************************************************.**********
COL LSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTI
N315 LSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTI
NCTC8325 LSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTI
Newman LSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTI
USA300_FPR3757 LSFIFIGMLGVLRGYYQSANNMTVPAISQVIEQVIRVGIIIVTIVIFVDRGWTIYEAGTI
************************************************************
COL AILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDS
N315 AILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDS
NCTC8325 AILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDS
Newman AILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDS
USA300_FPR3757 AILASTIGFLGSSIYLVAHRPFKFKMVNNTAKIVWKQFALSVLIFAISQLIVILWQVIDS
************************************************************
COL VTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVL
N315 VTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVL
NCTC8325 VTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVL
Newman VTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVL
USA300_FPR3757 VTIIKSLQAIRVPFDVAITEKGVYDRGASFIQMGLIVTTTFSFALIPLLSDAIKMNNQVL
************************************************************
COL MNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMD
N315 MNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMD
NCTC8325 MNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMD
Newman MNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMD
USA300_FPR3757 MNRYANASLKITILISTAAGIGLINLLPLMNGVFFKTNDLTLTLSVYMITVICVSLIMMD
************************************************************
COL MALLQAQHAVRPIFVGMTAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVT
N315 MALLQAQHAVRPIFVGMTAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVT
NCTC8325 MALLQAQHAVRPIFVGMTAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVT
Newman MALLQAQHAVRPIFVGMTAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVT
USA300_FPR3757 MALLQAQHAVRPIFVGMTAGLVIKFILNIILIRLSGIIGASISTVVSLIIFGTIIHIAVT
************************************************************
COL RKYHLYAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRITGLIELLCAAVLGIIALFFYI
N315 RKYHLHAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRFTGLIELLCAAVLGIIALFFYI
NCTC8325 RKYHLYAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRITGLIELLCAAVLGIIALFFYI
Newman RKYHLYAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRITGLIELLCAAVLGIIALFFYI
USA300_FPR3757 RKYHLYAMRRFFINVVLGMVFMSIVVQCVLNIVTTHGRITGLIELLCAAVLGIIALFFYI
*****:********************************:*********************
COL FRFNVLTYKELTYLPFGSKLYQIKKGRR
N315 FRFNVLTYKELTYLPFGSKLYQIKKGRR
NCTC8325 FRFNVLTYKELTYLPFGSKLYQIKKGRR
Newman FRFNVLTYKELTYLPFGSKLYQIKKGRR
USA300_FPR3757 FRFNVLTYKELTYLPFGSKLYQIKKGRR
****************************