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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002229000
- symbol?: rnmV
- synonym:
- description?: ribonuclease M5
- ribonuclease M5
- ribonuclease M5-like primase-related protein
- primase-like protein
- putative primase homolog
- RNAse M5
- toprim domain-containing protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2739341..2739638
- synteny block?: BlockID0015280
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0467
08BA02176:
C248_0547
11819-97:
MS7_0469 (rnmV)
6850:
RSAU_000429
71193:
ST398NM01_0558
ECT-R 2:
ECTR2_432
ED133:
SAOV_0514
ED98:
SAAV_0439
HO 5096 0412:
SAEMRSA15_04180
JH1:
SaurJH1_0526
JH9:
SaurJH9_0513
JKD6008:
SAA6008_00496
JKD6159:
SAA6159_00443
LGA251:
SARLGA251_04260
M013:
M013TW_0462
MRSA252:
SAR0493
MSHR1132:
SAMSHR1132_04360
MSSA476:
SAS0449
Mu3:
SAHV_0489
Mu50:
SAV0492
MW2:
MW0447
RF122:
SAB0441
ST398:
SAPIG0558
T0131:
SAT0131_00537
TCH60:
HMPREF0772_10028
TW20:
SATW20_05600
USA300_TCH1516:
USA300HOU_0492
VC40:
SAVC_02045
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRGVIVLTDPDFP
N315 MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRGVIVLTDPDFP
NCTC8325 MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRGVIVLTDPDFP
Newman MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRGVIVLTDPDFP
USA300_FPR3757 MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRGVIVLTDPDFP
************************************************************
COL GDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDIKEALMHVSSPFDEAYESI
N315 GDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDIKEALMHVSSPFDEAYESI
NCTC8325 GDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDIKEALMHVSSPFDEAYESI
Newman GDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLIDIKEALMHVSSPFDEAYESI
USA300_FPR3757 GDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHAELIDIKEALMHVSSPFDEAYESI
*************************************:**********************
COL DKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKKLNAFGYTEADVRQALEDE
N315 DKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKKLNAFGYTEADVRQALEDE
NCTC8325 DKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKKLNAFGYTEADVRQALEDE
Newman DKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKKLNAFGYTEADVRQALEDE
USA300_FPR3757 DKSVLIELGLIVGKDARRRREILSRKLRIGHSNGKQLLKKLNAFGYTEADVRQALEDE
**********************************************************