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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002225000
- symbol?: rsmI
- synonym:
- description?: rRNA (cytidine-2'-O-)-methyltransferase
- rRNA (cytidine-2'-O-)-methyltransferase
- 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
- tetrapyrrole methylase
- tetrapyrrole methylase family protein
- tetrapyrrole (corrin/porphyrin) methylase family protein
- rRNA small subunit methyltransferase I
- tetrapyrrole (Corrin/Porphyrin) Methylases family protein
- tetrapyrrole (corrin/porphyrin) methyltransferase
- Tetrapyrrole (Corrin-Porphyrin) methylase family protein UPF0011
- uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
- uroporphyrin-III C/tetrapyrrole methyltransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2735263..2736102
- synteny block?: BlockID0015240
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0464
08BA02176:
C248_0543
11819-97:
MS7_0466
6850:
RSAU_000426
71193:
ST398NM01_0555
ECT-R 2:
ECTR2_429
ED133:
SAOV_0510
ED98:
SAAV_0435
HO 5096 0412:
SAEMRSA15_04150
JH1:
SaurJH1_0523
JH9:
SaurJH9_0510
JKD6008:
SAA6008_00493
JKD6159:
SAA6159_00440
LGA251:
SARLGA251_04230
M013:
M013TW_0458
MRSA252:
SAR0490
MSHR1132:
SAMSHR1132_04330
MSSA476:
SAS0446
Mu3:
SAHV_0486
Mu50:
SAV0489
MW2:
MW0444
RF122:
SAB0438
ST398:
SAPIG0555
T0131:
SAT0131_00534
TCH60:
HMPREF0772_10032
TW20:
SATW20_05570
USA300_TCH1516:
USA300HOU_0489
VC40:
SAVC_02030
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKSYHEHNK
N315 MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKSYHEHNK
NCTC8325 MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKSYHEHNK
Newman MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKSYHEHNK
USA300_FPR3757 MAVLYLVGTPIGNLADITYRAVDVLKRVDMIACEDTRVTSKLCNHYDIPTPLKSYHEHNK
************************************************************
COL DKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVETVPGPNAGLTALM
N315 DKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVETVPGPNAGLTALM
NCTC8325 DKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVETVPGPNAGLTALM
Newman DKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVETVPGPNAGLTALM
USA300_FPR3757 DKQTAFIIEQLELGLDVALVSDAGLPLISDPGYELVVAAREANIKVETVPGPNAGLTALM
************************************************************
COL ASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYESPHRVTDTLKTIAKIDATRQ
N315 ASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYESPHRVTDTLKTIAKIDATRQ
NCTC8325 ASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYESPHRVTDTLKTIAKIDATRQ
Newman ASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYESPHRVTDTLKTIAKIDATRQ
USA300_FPR3757 ASGLPSYVYTFLGFLPRKEKEKSAVLEQRMHENSTLIIYESPHRVTDTLKTIAKIDATRQ
************************************************************
COL VSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILIEGAKANNEISWFDDLSINE
N315 VSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILIEGAKANNEISWFDDLSINE
NCTC8325 VSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILIEGAKANNEISWFDDLSINE
Newman VSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILIEGAKANNEISWFDDLSINE
USA300_FPR3757 VSLGRELTKKFEQIVTDDVTQLQALIQQGDVPLKGEFVILIEGAKANNEISWFDDLSINE
************************************************************
COL HVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYHQIS
N315 HVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYHQIS
NCTC8325 HVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYHQIS
Newman HVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYHQIS
USA300_FPR3757 HVDHYIQTSQMKPKQAIKKVAEERQLKTNEVYNIYHQIS
***************************************