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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002199000
- symbol?: —
- synonym:
- description?: YbaB/EbfC family nucleoid-associated protein
- YbaB/EbfC family nucleoid-associated protein
- putative DNA-binding protein, YbaB family
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2704785..2705102
- synteny block?: BlockID0015000
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0454
08BA02176:
C248_0530
11819-97:
MS7_0453
6850:
RSAU_000413
71193:
ST398NM01_0545
ECT-R 2:
ECTR2_414
ED133:
SAOV_0497
ED98:
SAAV_0423
HO 5096 0412:
SAEMRSA15_04050
JH1:
SaurJH1_0513
JH9:
SaurJH9_0500
JKD6008:
SAA6008_00483
JKD6159:
SAA6159_00428
LGA251:
SARLGA251_04120
M013:
M013TW_0444
MRSA252:
SAR0478
MSHR1132:
SAMSHR1132_04230
MSSA476:
SAS0436
Mu3:
SAHV_0476
Mu50:
SAV0479
MW2:
MW0434
RF122:
SAB0428
ST398:
SAPIG0545
T0131:
SAT0131_00520
TCH60:
HMPREF0772_10043
TW20:
SATW20_05470
USA300_TCH1516:
USA300HOU_0478
VC40:
SAVC_01980
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
N315 MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
NCTC8325 MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
Newman MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
USA300_FPR3757 MRGGGNMQQMMKQMQKMQKKMAQEQEKLKEERIVGTAGGGMVAVTVTGHKEVVDVEIKEE
************************************************************
COL AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
N315 AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
NCTC8325 AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
Newman AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
USA300_FPR3757 AVDPDDIEMLQDLVLAATNEAMNKADELTQERLGKHTQGLNIPGM
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