Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002178000
- symbol?: metQ2
- synonym:
- description?: ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- dipeptide ABC transporter glycylmethionine-binding lipoprotein
- methionine ABC transporter, substrate-binding protein, putative
- methionine ABC transporter substrate-binding protein
- NLPA lipoprotein
- ABC superfamily ATP binding cassette transporter, binding protein
- ABC transporter, substrate-binding protein
- ABC transporter ATP-binding protein
- lipoprotein
- membrane lipoprotein
- NLPA lipofamily protein
- putative lipoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2682131..2683004
- synteny block?: BlockID0014790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0439
08BA02176:
C248_0513
11819-97:
MS7_0437
6850:
RSAU_000396
71193:
ST398NM01_0529
ECT-R 2:
ECTR2_397
ED133:
SAOV_0481
ED98:
SAAV_0406
HO 5096 0412:
SAEMRSA15_03890
JH1:
SaurJH1_0498
JH9:
SaurJH9_0485
JKD6008:
SAA6008_00467
JKD6159:
SAA6159_00413
LGA251:
SARLGA251_03970
M013:
M013TW_0428
MRSA252:
SAR0463
MSHR1132:
SAMSHR1132_04080
MSSA476:
SAS0421
Mu3:
SAHV_0461
Mu50:
SAV0464
MW2:
MW0418
RF122:
SAB0413
ST398:
SAPIG0529
T0131:
SAT0131_00504
TCH60:
HMPREF0772_10059
TW20:
SATW20_05320
USA300_TCH1516:
USA300HOU_0464
VC40:
SAVC_01905
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKRLIGLVIVALVLLAACGGNNDKKVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDY
N315 MKRLIGLVIVALVLLAACGSNNDKKVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDY
NCTC8325 MKRLIGLVIVALVLLAACGGNNDKKVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDY
Newman MKRLIGLVIVALVLLAACGGNNDKKVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDY
USA300_FPR3757 MKRLIGLVIVALVLLAACGGNNDKKVTIGVASNDTKAWEKVKELAKKDDIDVEIKHFSDY
*******************.****************************************
COL NLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVK
N315 NLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVK
NCTC8325 NLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVK
Newman NLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVK
USA300_FPR3757 NLPNKALNDGDIDMNAFQHFAFLDQYKKAHKGTKISALSTTVLAPLGIYSDKIKDVKKVK
************************************************************
COL DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTA
N315 DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTA
NCTC8325 DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTA
Newman DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTA
USA300_FPR3757 DGAKVVIPNDVSNQARALKLLEAAGLIKLKKDFGLAGTVKDITSNPKHLKITAVDAQQTA
************************************************************
COL RALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKI
N315 RALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKI
NCTC8325 RALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKI
Newman RALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKI
USA300_FPR3757 RALSDVDIAVINNGVATKAGKDPKNDPIFLEKSNSDAVKPYINIVAVNDKDLDNKTYAKI
************************************************************
COL VELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK
N315 VELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK
NCTC8325 VELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK
Newman VELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK
USA300_FPR3757 VELYHSKEAQKALQEDVKDGEKPVNLSKDEIKAIETSLAK
****************************************