From AureoWiki
Jump to navigation Jump to search

Summary[edit | edit source]

  • pan ID?: SAUPAN002177000
  • symbol?: metP2
  • synonym:
  • description?: ABC transporter permease

      descriptions from strain specific annotations:

    • ABC transporter permease
    • methionine ABC transporter permease
    • methionine uptake ABC transporter, permease
    • D-methionine transport system permease protein metI
    • ABC transporter ATP-binding protein
    • binding--dependent transport system inner membrane component family protein
    • binding-protein-dependent transport system inner membrane protein
    • metal ion ABC superfamily ATP binding cassette transporter, membrane protein
    • Methionine ABC transporter permease protein
    • putative transport system membrane protein
  • strand?: +
  • coordinates?: 2681462..2682121
  • synteny block?: BlockID0014780
  • occurrence?: in 97% of 34 strains

gmpB (metP2) : glycylmethionine import permease [1]

Staphylococcus aureus produces two highly-similar methionine import-like ABC transporters with different substrate specificities. This version is specific for glycylmethionine dipeptides. The other version transports methionine.

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0438
    08BA02176:
    C248_0512
    11819-97:
    MS7_0436
    6850:
    RSAU_000395
    71193:
    ST398NM01_0528
    ECT-R 2:
    ECTR2_396
    ED133:
    SAOV_0480
    ED98:
    SAAV_0405
    HO 5096 0412:
    SAEMRSA15_03880
    JH1:
    SaurJH1_0497
    JH9:
    SaurJH9_0484
    JKD6008:
    SAA6008_00466
    JKD6159:
    SAA6159_00412
    JSNZ:
    JSNZ_000395
    LGA251:
    SARLGA251_03960
    M013:
    M013TW_0427
    MRSA252:
    SAR0462
    MSHR1132:
    SAMSHR1132_04070
    MSSA476:
    SAS0420
    Mu3:
    SAHV_0460
    Mu50:
    SAV0463
    MW2:
    MW0417
    RF122:
    SAB0412
    ST398:
    SAPIG0528
    T0131:
    SAT0131_00502
    TCH60:
    HMPREF0772_10060 (metI)
    TW20:
    SATW20_05310
    USA300_TCH1516:
    VC40:
    SAVC_01900

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNP
    N315            MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNP
    NCTC8325        MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNP
    Newman          MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNP
    USA300_FPR3757  MFGSDLDSAQLLQALYETLYMVSIALFLGAVIGIPLGVLLVITRKQGIWPNIVIHQVLNP
                    ************************************************************

    COL             LINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEG
    N315            LINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEG
    NCTC8325        LINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEG
    Newman          LINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEG
    USA300_FPR3757  LINILRSLPFIILLIAIVPFTKLVVGTSIGTTAAIVPLTVYVAPYIARLVENSLLEVDEG
                    ************************************************************

    COL             IIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALV
    N315            IIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALV
    NCTC8325        IIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALV
    Newman          IIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALV
    USA300_FPR3757  IIEAAKAMGASPLQIIRYFLIPEALGSLVLAITTAIIGLIGSTAMAGAVGGGGIGDLALV
                    ************************************************************

    COL             YGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRRH
    N315            YGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRRH
    NCTC8325        YGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRRH
    Newman          YGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRRH
    USA300_FPR3757  YGYQRFDTTVIIITVIVLVIIVQVIQTLGNVLARFIRRH
                    ***************************************

  1. Wade A Williams, Rong-gaung Zhang, Min Zhou, Grazyna Joachimiak, Piotr Gornicki, Dominique Missiakas, Andrzej Joachimiak
    The membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus binds the dipeptide GlyMet via side chain interactions.
    Biochemistry: 2004, 43(51);16193-202
    [PubMed:15610013] [WorldCat.org] [DOI] (P p)