PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001995000
• symbol^?: pbuX
• synonym:
• description^?: xanthine permease

  descriptions from strain specific annotations:

  • xanthine permease
  • purine permease
  • xanthine/uracil permease
  • xanthine permease, putative
  • NCS2 family nucleobase:cation symporter-2
  • NCS2 nucleobase cation symporter, PbuX
  • putative xanthine permease
  • uracil-xanthine permease
  • xanthine permease family protein
• strand^?: +
• coordinates^?: 2459294..2460562
• synteny block^?: BlockID0013480
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0459 (pbuX)
N315:
SA0374 (pbuX)
NCTC8325:
SAOUHSC_00373
Newman:
NWMN_0379 (pbuX)
USA300_FPR3757:
SAUSA300_0387 (pbuX)
04-02981:
SA2981_0387 (pbuX)
08BA02176:
C248_0445 (pbuX)
11819-97:
MS7_0378 (pbuX)
6850:
RSAU_000333 (pbuX)
71193:
ST398NM01_0466
ECT-R 2:
ECTR2_348 (pbuX)
ED133:
SAOV_0411 (pbuX)
ED98:
SAAV_0356 (pbuX)
HO 5096 0412:
SAEMRSA15_03410 (pbuX)
JH1:
SaurJH1_0447
JH9:
SaurJH9_0436
JKD6008:
SAA6008_00388 (pbuX)
JKD6159:
SAA6159_00363 (pbuX)
LGA251:
SARLGA251_03490 (pbuX)
M013:
M013TW_0368
MRSA252:
SAR0407 (pbuX)
MSHR1132:
SAMSHR1132_03600
MSSA476:
SAS0365
Mu3:
SAHV_0386 (pbuX)
Mu50:
SAV0389 (pbuX)
MW2:
MW0365 (pbuX)
RF122:
SAB0339 (pbuX)
ST398:
SAPIG0466
T0131:
SAT0131_00421
TCH60:
HMPREF0772_10105 (pbuX)
TW20:
SATW20_04550 (pbuX)
USA300_TCH1516:
USA300HOU_0412 (pbuX)
VC40:
SAVC_01695

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTG
  N315            MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTG
  NCTC8325        MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTG
  Newman          MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTG
  USA300_FPR3757  MKNLILSVQHLLAMYAGAILVPIIVGTSLKFTPEQIAYLVTVDIFMCGVATFLQANKVTG
                  ************************************************************
  
  COL             TGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTG
  N315            TGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTG
  NCTC8325        TGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTG
  Newman          TGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTG
  USA300_FPR3757  TGLPIVLGCTFTAVAPMILIGQTKGIDVLYGSLFLSGILVIIIAPFFSHLVKFFPPVVTG
                  ************************************************************
  
  COL             SVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAIL
  N315            SVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILVLQRFTTGFIKSIAIL
  NCTC8325        SVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAIL
  Newman          SVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAIL
  USA300_FPR3757  SVVTIIGINLMPVAMNYLAGGQGAKDYGDVKNILLGLMTLIIILLLQRFTTGFIKSIAIL
                  ********************************************:***************
  
  COL             IGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIEST
  N315            IGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFILAIVSLIEST
  NCTC8325        IGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIEST
  Newman          IGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIEST
  USA300_FPR3757  IGLVLGTIGAGLLGMVDINQVNHAGWLGIPVPFRFSGFSFDVTSTLVFFIVAIVSLIEST
                  **************************************************:*********
  
  COL             GVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNN
  N315            GVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNN
  NCTC8325        GVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNN
  Newman          GVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNN
  USA300_FPR3757  GVYHALSEITGKKLERKDFRKGYTAEGLAIVLGSIFNSFPYTAYSQNVGLVSLSGAKKNN
                  ************************************************************
  
  COL             VIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNL
  N315            VIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNL
  NCTC8325        VIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNL
  Newman          VIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNL
  USA300_FPR3757  VIYGMVVLLLICGCIPKLGALANIIPLPVLGGAMIAMFGMVMAYGVSILGHIDFKNQNNL
                  ************************************************************
  
  COL             LIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEEN
  N315            LIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEEN
  NCTC8325        LIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEEN
  Newman          LIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEEN
  USA300_FPR3757  LIIAVSVGLGTGISAVPQAFKGLGEQFAWLTQNGIVLGAISAIILNFFFNGIKYKQTEEN
                  ************************************************************
  
  COL             VK
  N315            VK
  NCTC8325        VK
  Newman          VK
  USA300_FPR3757  VK
                  **