Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN001240000
- symbol?: nanK
- synonym:
- description?: ROK family protein
- ROK family protein
- NagC sugar kinase domain protein
- glucokinase
- N-acetylmannosamine kinase
- putative ROK family protein
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1525116..1526018
- synteny block?: BlockID0007510
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0315
08BA02176:
C248_0305
11819-97:
MS7_0306
6850:
RSAU_000262
71193:
ST398NM01_0329
ECT-R 2:
ECTR2_276
ED133:
SAOV_0269
ED98:
SAAV_0283
HO 5096 0412:
SAEMRSA15_02720
JH1:
SaurJH1_0306
JH9:
SaurJH9_0299
JKD6008:
SAA6008_00292
JKD6159:
SAA6159_00292
LGA251:
SARLGA251_02780
M013:
M013TW_0297
MRSA252:
SAR0313
MSHR1132:
SAMSHR1132_02900
MSSA476:
SAS0293
Mu3:
SAHV_0313
Mu50:
SAV0316
MW2:
MW0293
RF122:
SAB0253
ST398:
SAPIG0329
T0131:
SAT0131_00320 (tnpC-3)
TCH60:
HMPREF0772_10179
TW20:
SATW20_03210
USA300_TCH1516:
USA300HOU_0336
VC40:
SAVC_01330
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKVYEIVTGYMKQYQLIQP
N315 MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKVYEIVTGYMKQYQLIQP
NCTC8325 MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKVYEIVTGYMKQYQLIQP
Newman MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKVYEIVTGYMKQYQLIQP
USA300_FPR3757 MYYIAIDIGGTQIKSAVIDKQLNMFDYQQISTPDNKSELITDKVYEIVTGYMKQYQLIQP
************************************************************
COL VIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPYVKVKNDVNAALLGELKLH
N315 VIGISSAGVVDEQKGEIGYAGPTIPNYKGTNFKRLLKSLSPYVKVKNDVNAALLGELKLH
NCTC8325 VIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPYVKVKNDVNAALLGELKLH
Newman VIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPYVKVKNDVNAALLGELKLH
USA300_FPR3757 VIGISSAGVVDEQKGEIVYAGPTIPNYKGTNFKRLLKSLSPYVKVKNDVNAALLGELKLH
***************** ******************************************
COL QYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGYLLYRPTENTTFEQRAATSAL
N315 QYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGYLLYRPTENTTFEQRAATSAL
NCTC8325 QYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGYLLYRPTENTTFEQRAATSAL
Newman QYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGYLLYRPTENTTFEQRAATSAL
USA300_FPR3757 QYQAERIFCMTLGTGIGGAYKNNQGHIDNGELHKANEVGYLLYRPTENTTFEQRAATSAL
************************************************************
COL KKRMIAGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAEDVAEGIAQIQVMYDPGLILIGG
N315 KKRMIDGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAEDVAEGIAQIQVMYDPGLILIGG
NCTC8325 KKRMIAGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAEDVAEGIAQIQVMYDPGLILIGG
Newman KKRMIAGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAEDVAEGIAQIQVMYDPGLILIGG
USA300_FPR3757 KKRMIAGGFTRSTHVPVLFEAAEEGDDIAKQILNEWAEDVAEGIAQIQVMYDPGLILIGG
***** ******************************************************
COL GISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSKNDAALYGCLQ
N315 GISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSKNDAALYGCLQ
NCTC8325 GISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSKNDAALYGCLQ
Newman GISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSKNDAALYGCLQ
USA300_FPR3757 GISEQGDNLIKYIEPKVAHYLPKDYVYAPIQTTKSKNDAALYGCLQ
**********************************************