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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001105000
- symbol?: hmp
- synonym:
- description?: nitric oxide dioxygenase
- nitric oxide dioxygenase
- flavohemoprotein
- flavohemoprotein, putative
- globin domain-containing protein
- putative flavohemoprotein
- Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase)
- dihydropteridine reductase
- flavohemo(Hemoglobin-like protein) (Flavohemoglobin) (Nitricoxide dioxygenase) (NO oxygenase) (NOD)
- globin
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1383109..1384254
- synteny block?: BlockID0006250
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0240
08BA02176:
C248_0225
11819-97:
MS7_0226 (yhb1)
6850:
RSAU_000185
71193:
ST398NM01_0251
ECT-R 2:
ECTR2_200
ED133:
SAOV_0177
ED98:
SAAV_0205
HO 5096 0412:
SAEMRSA15_01990
JH1:
SaurJH1_0230
JH9:
SaurJH9_0224
JKD6008:
SAA6008_00210
JKD6159:
SAA6159_00217
LGA251:
SARLGA251_02040
M013:
M013TW_0219
MRSA252:
SAR0233
MSHR1132:
SAMSHR1132_02080
MSSA476:
SAS0216
Mu3:
SAHV_0239
Mu50:
SAV0240
MW2:
MW0216
RF122:
SAB0179c
ST398:
SAPIG0251
T0131:
SAT0131_00230
TCH60:
HMPREF0772_10264 (hmpA)
TW20:
SATW20_02420
USA300_TCH1516:
USA300HOU_0249 (hmp)
VC40:
SAVC_00940
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQA
N315 MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQA
NCTC8325 MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQA
Newman MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQA
USA300_FPR3757 MLTEQEKDIIKQTVPLLKEKGTEITSIFYPKMFKAHPELLNMFNQTNQKRGMQSSALAQA
************************************************************
COL VMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQ
N315 VMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGENLLKAIQDVTGLEEHDPVIQ
NCTC8325 VMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQ
Newman VMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQ
USA300_FPR3757 VMAAAVNIDNLSVIKPVIMPVAYKHCALQVYAEHYPIVGKNLLKAIQDVTGLEENDPVIQ
***************************************:**************:*****
COL AWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFT
N315 AWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFT
NCTC8325 AWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFT
Newman AWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFT
USA300_FPR3757 AWAKAYGVIADVFIQIEKEIYDQMMWIGFKPFKITNIKQESEDIKSFTVETEEYDFSEFT
************************************************************
COL PGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGD
N315 PGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGD
NCTC8325 PGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGD
Newman PGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGD
USA300_FPR3757 PGQYITVDVSSDKLPYRAKRHYSIVSGEKNHLTFGVKRDVTTEHEGEVSTILHDEIKEGD
************************************************************
COL MINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPF
N315 MINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPF
NCTC8325 MINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPF
Newman MINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPF
USA300_FPR3757 MINLAAPVGGFVLENTTEPQLFLGSGIGVTPLVAMYEAASAKGLDTQMVQVAENEQHLPF
************************************************************
COL KDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQVFLANKPEIYICGGTKFLQSMIEALKS
N315 KDNFNSIASHYDNAKLYTHLKDKQGYIGTEELQAFLANKPEIYICGGTKFLQSMIEALKS
NCTC8325 KDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQVFLANKPEIYICGGTKFLQSMIEALKS
Newman KDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQVFLANKPEIYICGGTKFLQSMIEALKS
USA300_FPR3757 KDNFNSIASHHDNAKLYTHLKDKQGYIGAEELQVFLANKPEIYICGGTKFLQSMIEALKS
**********:*****************:****.**************************
COL LNYDMDRVHYETFIPRLSVAV
N315 LNYDMDRVHYETFIPRLSVAV
NCTC8325 LNYDMDRVHYETFIPRLSVAV
Newman LNYDMDRVHYETFIPRLSVAV
USA300_FPR3757 LNYDMDRVHYETFIPRLSVAV
*********************