PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001064000
• symbol^?: malK
• synonym:
• description^?: sugar ABC transporter ATP-binding protein

  descriptions from strain specific annotations:

  • sugar ABC transporter ATP-binding protein
  • multiple sugar-binding transport ATP-binding protein
  • maltose ABC transporter ATP-binding protein
  • putative maltose ABC transporter ATP-binding protein
  • sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
  • sugar ABC transporter, ATP-binding protein, putative
  • maltose/maltodextrin ABC superfamily ATP binding cassette transporter, ABC protein
  • Maltose/maltodextrin transport ATP-binding protein MalK
  • ABC transporter
  • ABC transporter ATP-binding protein ycjV
  • ABC transporter family protein
  • maltose/maltodextrin ABC transporter ATP-binding protein
  • maltose ABC transporter, ATP-binding protein, putative
  • Multiple sugar ABC transporter, ATP-binding protein
  • putative ABC transporter ATP-binding protein
  • sn-glycerol-3-phosphate import ATP-binding protein UgpC
• strand^?: +
• coordinates^?: 1341123..1342220
• synteny block^?: BlockID0005860
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0192
N315:
SA0206 (msmX)
NCTC8325:
SAOUHSC_00175
Newman:
NWMN_0151
USA300_FPR3757:
SAUSA300_0208
04-02981:
SA2981_0214 (malK)
08BA02176:
C248_0197
11819-97:
MS7_0199
6850:
RSAU_000157
71193:
ST398NM01_0223
ECT-R 2:
ECTR2_174
ED133:
SAOV_0151
ED98:
SAAV_0179
HO 5096 0412:
SAEMRSA15_01720
JH1:
SaurJH1_0204
JH9:
SaurJH9_0198
JKD6008:
SAA6008_00182 (msmX)
JKD6159:
SAA6159_00188 (msmX)
LGA251:
SARLGA251_01770
M013:
M013TW_0193
MRSA252:
SAR0205
MSHR1132:
SAMSHR1132_01790
MSSA476:
SAS0189
Mu3:
SAHV_0212 (msmX)
Mu50:
SAV0213 (msmX)
MW2:
MW0189 (msmX)
RF122:
SAB0151
ST398:
SAPIG0223
T0131:
SAT0131_00198 (dnaK)
TCH60:
HMPREF0772_10294
TW20:
SATW20_02140
USA300_TCH1516:
USA300HOU_0220
VC40:
SAVC_00805

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  N315            MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  NCTC8325        MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  Newman          MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  USA300_FPR3757  MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
                  ************************************************************
  
  COL             FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  N315            FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  NCTC8325        FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  Newman          FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  USA300_FPR3757  FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
                  ************************************************************
  
  COL             ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  N315            ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  NCTC8325        ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  Newman          ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  USA300_FPR3757  ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
                  ************************************************************
  
  COL             HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  N315            HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  NCTC8325        HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  Newman          HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  USA300_FPR3757  HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
                  ************************************************************
  
  COL             NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  N315            NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  NCTC8325        NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  Newman          NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  USA300_FPR3757  NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
                  ************************************************************
  
  COL             TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  N315            TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMTNDKITLAFDMNKCHFFDEKT
  NCTC8325        TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  Newman          TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  USA300_FPR3757  TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
                  ***************************************:********************
  
  COL             GNRIV
  N315            GNRIV
  NCTC8325        GNRIV
  Newman          GNRIV
  USA300_FPR3757  GNRIV
                  *****