PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001064000
• symbol^?: malK
• synonym:
• description^?: sugar ABC transporter ATP-binding protein

  descriptions from strain specific annotations:

  • sugar ABC transporter ATP-binding protein
  • multiple sugar-binding transport ATP-binding protein
  • ABC transporter ATP-binding protein
  • maltose ABC transporter ATP-binding protein
  • putative maltose ABC transporter ATP-binding protein
  • sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
  • sugar ABC transporter, ATP-binding protein, putative
  • maltose/maltodextrin ABC superfamily ATP binding cassette transporter, ABC protein
  • Maltose/maltodextrin transport ATP-binding protein MalK
  • ABC transporter
  • ABC transporter ATP-binding protein ycjV
  • ABC transporter family protein
  • maltose/maltodextrin ABC transporter ATP-binding protein
  • maltose ABC transporter, ATP-binding protein, putative
  • Multiple sugar ABC transporter, ATP-binding protein
  • putative ABC transporter ATP-binding protein
  • sn-glycerol-3-phosphate import ATP-binding protein UgpC
• strand^?: +
• coordinates^?: 1341123..1342220
• synteny block^?: BlockID0005860
• occurrence^?: in 100% of 34 strains

malK : maltodextrin transport system ATP-binding subunit

• the nomenclature of the malKEFG ATP transport system is inconsistently applied across organisms. By convention, MalK is the ATPase and MalE is the substrate binding protein. However, nomenclature for the ATPase (i.e. MsmK, MsmX) as well as the permease components (i.e. MalC, malD) is not consistently applied in E. coli, B. subtilis, S. pneumoniae and E. faecalis.

⊟Orthologs

COL:
SACOL0192
N315:
SA0206 (msmX)
NCTC8325:
SAOUHSC_00175
Newman:
NWMN_0151
USA300_FPR3757:
SAUSA300_0208
04-02981:
SA2981_0214 (malK)
08BA02176:
C248_0197
11819-97:
MS7_0199
6850:
RSAU_000157
71193:
ST398NM01_0223
ECT-R 2:
ECTR2_174
ED133:
SAOV_0151
ED98:
SAAV_0179
HO 5096 0412:
SAEMRSA15_01720
JH1:
SaurJH1_0204
JH9:
SaurJH9_0198
JKD6008:
SAA6008_00182 (msmX)
JKD6159:
SAA6159_00188 (msmX)
JSNZ:
JSNZ_000150
LGA251:
SARLGA251_01770
M013:
M013TW_0193
MRSA252:
SAR0205
MSHR1132:
SAMSHR1132_01790
MSSA476:
SAS0189
Mu3:
SAHV_0212 (msmX)
Mu50:
SAV0213 (msmX)
MW2:
MW0189 (msmX)
RF122:
SAB0151
ST398:
SAPIG0223
T0131:
SAT0131_00198 (dnaK)
TCH60:
HMPREF0772_10294
TW20:
SATW20_02140
USA300_TCH1516:
USA300HOU_0220
VC40:
SAVC_00805

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  N315            MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  NCTC8325        MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  Newman          MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
  USA300_FPR3757  MAELKLEHIKKTYDNNNTVVKDFNLHITDKEFIVFVGPSGCGKSTTLRMVAGLESITSGD
                  ************************************************************
  
  COL             FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  N315            FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  NCTC8325        FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  Newman          FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
  USA300_FPR3757  FYIDGERMNDVEPKNRDIAMVFQNYALYPHMTVFENMAFGLKLRKVNKKEIEQKVNEAAE
                  ************************************************************
  
  COL             ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  N315            ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  NCTC8325        ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  Newman          ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
  USA300_FPR3757  ILGLTEYLGRKPKALSGGQRQRVALGRAIVRDAKVFLMDEPLSNLDAKLRVQMRTEILKL
                  ************************************************************
  
  COL             HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  N315            HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  NCTC8325        HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  Newman          HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
  USA300_FPR3757  HKRLNTTTIYVTHDQTEALTMASRIVVLKDGDIMQVGTPREIYDAPNCIFVAQFIGSPAM
                  ************************************************************
  
  COL             NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  N315            NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  NCTC8325        NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  Newman          NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
  USA300_FPR3757  NMLNATVEMDGLKVGTHHFKLHNKKFEKLKAAGYLDKEIILGIRAEDIHEEPIFIQTSPE
                  ************************************************************
  
  COL             TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  N315            TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMTNDKITLAFDMNKCHFFDEKT
  NCTC8325        TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  Newman          TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
  USA300_FPR3757  TQFESEVVVSELLGSEIMVHSTFQGMELISKLDSRTQVMANDKITLAFDMNKCHFFDEKT
                  ***************************************:********************
  
  COL             GNRIV
  N315            GNRIV
  NCTC8325        GNRIV
  Newman          GNRIV
  USA300_FPR3757  GNRIV
                  *****