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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001012000
- symbol?: ssuC
- synonym:
- description?: ABC transporter permease
- ABC transporter permease
- putative ABC transporter permease
- ABC superfamily ATP binding cassette transporter, membrane protein
- ABC transporter, permease protein
- ABC transporter ATP-binding protein
- ABC transporter permease protein
- binding--dependent transport system inner membrane component family protein
- binding-protein-dependent transport system inner membrane component family protein
- binding-protein-dependent transport system inner membrane protein
- putative transport system permease
- transport system permease
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1278008..1278769
- synteny block?: BlockID0005400
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0175
08BA02176:
C248_0163
11819-97:
MS7_0167
6850:
RSAU_000127
71193:
ST398NM01_0188
ECT-R 2:
ECTR2_137
ED133:
SAOV_0120
ED98:
SAAV_0141
HO 5096 0412:
SAEMRSA15_01390
JH1:
SaurJH1_0164
JH9:
SaurJH9_0159
JKD6008:
SAA6008_00151
JKD6159:
SAA6159_00157
LGA251:
SARLGA251_01470
M013:
M013TW_0163
MRSA252:
SAR0175
MSHR1132:
SAMSHR1132_01470
MSSA476:
SAS0149
Mu3:
SAHV_0173
Mu50:
SAV0174
MW2:
MW0148
RF122:
SAB0114
ST398:
SAPIG0188
T0131:
SAT0131_00164
TCH60:
HMPREF0772_10325
TW20:
SATW20_01840
USA300_TCH1516:
USA300HOU_0187
VC40:
SAVC_00635
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHL
N315 MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHL
NCTC8325 MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHL
Newman MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHL
USA300_FPR3757 MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWSFIVTGEIFQHL
************************************************:***********
COL AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
N315 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
NCTC8325 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
Newman AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
USA300_FPR3757 AISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
************************************************************
COL GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIM
N315 GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIM
NCTC8325 GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIM
Newman GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIM
USA300_FPR3757 GSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIM
************************************************************
COL AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
N315 AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
NCTC8325 AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
Newman AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
USA300_FPR3757 AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
************************************************************
COL SYIEQFILRRFGE
N315 SYIEQFILRRFGE
NCTC8325 SYIEQFILRRFGE
Newman SYIEQFILRRFGE
USA300_FPR3757 SYIEQFILRRFGE
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