PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN000982000
• symbol^?: capH
• synonym:
• description^?: O-acetyltransferase

  descriptions from strain specific annotations:

  • O-acetyltransferase
  • capsular polysaccharide biosynthesis protein Cap5H
  • capsular polysaccharide biosynthesis protein O-acetyl transferase Cap5H
  • capsular polysaccharide synthesis enzyme O-acetyl transferase CapH
  • capsular polysaccharide synthesis protein O-acetyl transferase Cap5H
  • acetyltransferase
  • Capsular polysaccharide synthesis enzyme Cap5H
  • capsular polysaccharide synthesis enzyme O-acetyl transferase Cap5H
  • chloramphenicol acetyltransferase
• strand^?: +
• coordinates^?: 1237860..1244537
• synteny block^?: BlockID0005160
• occurrence^?: in 58% of 33 strains

⊟Orthologs

COL:
SACOL0143 (cap5H)
N315:
SA0151 (capH)
NCTC8325:
SAOUHSC_00121
Newman:
NWMN_0102 (capH)
USA300_FPR3757:
SAUSA300_0159 (cap5H)
04-02981:
SA2981_0157 (capH)
08BA02176:
C248_0145 (capH)
11819-97:
—
6850:
—
71193:
ST398NM01_0170
ECT-R 2:
ECTR2_113
ED133:
—
ED98:
SAAV_0124 (cap5H)
HO 5096 0412:
SAEMRSA15_01220 (cap5H)
JH1:
SaurJH1_0147
JH9:
SaurJH9_0142
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_01300
M013:
—
MRSA252:
—
MSHR1132:
—
MSSA476:
—
Mu3:
SAHV_0155 (capH)
Mu50:
SAV0156 (capH)
MW2:
—
RF122:
—
ST398:
SAPIG0170
T0131:
—
TCH60:
—
TW20:
—
USA300_TCH1516:
USA300HOU_0170 (cap5H)
VC40:
SAVC_00550

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF
  N315            MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF
  NCTC8325        MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF
  Newman          MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF
  USA300_FPR3757  MRIAIEKIIGLLKNQSSKESNVKIHRLAYITNSKFDGNNYIDRWCKIRNSHIGEYSYIGF
                  ************************************************************
  
  COL             GSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRT
  N315            GSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRT
  NCTC8325        GSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRT
  Newman          GSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRT
  USA300_FPR3757  GSDFNNVEVGRYCSISSDVKIGLGKHPTHFFSSSPIFYSNNNPFNIKQKFIDFNDQPSRT
                  ************************************************************
  
  COL             TIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIE
  N315            TIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIE
  NCTC8325        TIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIE
  Newman          TIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIE
  USA300_FPR3757  TIKNDVWIGANVIIMDGLTINTGAVIAAGSVVTKNVGAYEVVGGVPAKVIKKRFDNKTIE
                  ************************************************************
  
  COL             KLLESKWWEKTPDKLKGFSVEYLNKKDT
  N315            KLLESKWWEKTPDKLKGFSVEYLNKKDT
  NCTC8325        KLLESKWWEKTPDKLKGFSVEYLNKKDT
  Newman          KLLESKWWEKTPDKLKGFSVEYLNKKDT
  USA300_FPR3757  KLLESKWWEKTPDKLKGFSVEYLNKKDT
                  ****************************