Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN000910000
- symbol?: sarS
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- accessory regulator
- accessory regulator A-like protein
- accessory regulator-like protein
- accessory regulator S
- HTH-type transcriptional regulator SarS
- staphylococcal accessory regulator S
- regulatory protein
- accessory regulator H1
- HTH-type transcriptional regulator SarS (Staphylococcal accessoryregulator S)
- marR family protein
- putative regulatory protein
- SarA family transcriptional regulator
- SarS family transcriptional regulator
- staphylococcal accessory regulator A
- staphylococcal accessory regulator A, SarH2
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 1178516..1179268
- synteny block?: BlockID0004470
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0113 (sarH1)
08BA02176:
C248_0100 (sars)
11819-97:
MS7_0104 (sarS)
6850:
RSAU_000066 (sarS)
71193:
ST398NM01_0123
ECT-R 2:
ECTR2_68
ED133:
SAOV_0059 (sarS)
ED98:
SAAV_0080 (sarS)
HO 5096 0412:
SAEMRSA15_00780
JH1:
SaurJH1_0103
JH9:
SaurJH9_0099
JKD6008:
SAA6008_00090 (sarH2)
JKD6159:
SAA6159_00095 (sarH2)
LGA251:
SARLGA251_00870 (sarS)
M013:
M013TW_0102
MRSA252:
SAR0115
MSHR1132:
SAMSHR1132_00880
MSSA476:
SAS0086
Mu3:
SAHV_0111 (sarH1)
Mu50:
SAV0112 (sarH1)
MW2:
MW0085 (sarH1)
RF122:
SAB0051c (sarS)
ST398:
SAPIG0123
T0131:
SAT0131_00097
TCH60:
HMPREF0772_10385 (sarS)
TW20:
SATW20_01240 (sarS)
USA300_TCH1516:
USA300HOU_0123 (sarH1)
VC40:
SAVC_00300
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --------MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLP
N315 --------MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLP
NCTC8325 --------MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLP
Newman MHIQGDKTMKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLP
USA300_FPR3757 --------MKYNNHDKIRDFIIIEAYMFRFKKKVKPEVDMTIKEFILLTYLFHQQENTLP
****************************************************
COL FKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFD
N315 FKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFD
NCTC8325 FKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFD
Newman FKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFD
USA300_FPR3757 FKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDERNTYISISEEQREKIAERVTLFD
************************************************************
COL QIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNK
N315 QIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNK
NCTC8325 QIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNK
Newman QIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNK
USA300_FPR3757 QIIKQFNLADQSESQMIPKDSKEFLNLMMYTMYFKNIIKKHLTLSFVEFTILAIITSQNK
************************************************************
COL NIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLL
N315 NIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLL
NCTC8325 NIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLL
Newman NIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLL
USA300_FPR3757 NIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERKILIHMDDAQQDHAEQLL
************************************************************
COL AQVNQLLADKDHLHLVFE
N315 AQVNQLLADKDHLHLVFE
NCTC8325 AQVNQLLADKDHLHLVFE
Newman AQVNQLLADKDHLHLVFE
USA300_FPR3757 AQVNQLLADKDHLHLVFE
******************