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⊟Summary[edit | edit source]
- pan ID?: SAUPAN000035000
- symbol?: walI
- synonym:
- description?: YycI
- YycI
- yycI protein
- regulatory protein YycI
- yycH family protein
- YycI like protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 35231..36019
- synteny block?: BlockID0000320
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0021
08BA02176:
C248_0024 (yycI)
11819-97:
MS7_0023
6850:
RSAU_000023 (yycI)
71193:
ST398NM01_0023
ECT-R 2:
ECTR2_23
ED133:
SAOV_0023 (yycI)
ED98:
SAAV_0025 (yycI)
HO 5096 0412:
SAEMRSA15_00210 (yycI)
JH1:
SaurJH1_0021
JH9:
SaurJH9_0021
JKD6008:
SAA6008_00021 (yycI)
JKD6159:
SAA6159_00021 (yycI)
LGA251:
SARLGA251_00210 (yycI)
M013:
M013TW_0024
MRSA252:
SAR0021 (yycI)
MSHR1132:
SAMSHR1132_00220
MSSA476:
SAS0021
Mu3:
SAHV_0021
Mu50:
SAV0021
MW2:
MW0021
RF122:
SAB0021 (yycI)
ST398:
SAPIG0023
T0131:
SAT0131_00023 (engA)
TCH60:
HMPREF0772_10447 (yycI)
TW20:
SATW20_00210 (yycI)
USA300_TCH1516:
USA300HOU_0021 (yycI)
VC40:
SAVC_00105
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
N315 MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPASILNKS
NCTC8325 MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
Newman MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
USA300_FPR3757 MNWKLTKTLFIFVFILVNIVLVSIYVNKVNRSHINEVESNNEVNFQQEEIKVPTSILNKS
*****************************************************:******
COL VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
N315 VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
NCTC8325 VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
Newman VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
USA300_FPR3757 VKGIKLEQITGRSKDFSSKAKGDSDLTTSDGGKLLNANISQSVKVSDNNLKDLKDYVNKR
************************************************************
COL VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
N315 VFKGSEYQLSEINSGSVKYEQTYDNFPILNNSKAMLNFNIEDNKAASYKQSMMDDIKPTD
NCTC8325 VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
Newman VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
USA300_FPR3757 VFKGAEYQLSEISSDSVKYEQTYDDFPILNNSKAMLNFNIEDNKATSYKQSMMDDIKPTD
****:*******.*.*********:********************:**************
COL GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
N315 GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
NCTC8325 GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
Newman GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
USA300_FPR3757 GADKKHQVIGVRKAIEALYYNRYLKKGDEVINARLGYYSVVNETNVQLLQPNWEIKVKHD
************************************************************
COL GKDKTNTYYVEATNNNPKIINH
N315 GKDKTNTYYVEATNNNPKIINH
NCTC8325 GKDKTNTYYVEATNNNPKIINH
Newman GKDKTNTYYVEATNNNPKIINH
USA300_FPR3757 GKDKTNTYYVEATNNNPKIINH
**********************