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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus COL
- locus tag: SACOL_RS12105 [old locus tag: SACOL2301 ]
- pan locus tag?: SAUPAN005786000
- symbol: SACOL_RS12105
- pan gene symbol?: fdhA
- synonym:
- product: formate dehydrogenase subunit alpha
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SACOL_RS12105 [old locus tag: SACOL2301 ]
- symbol: SACOL_RS12105
- product: formate dehydrogenase subunit alpha
- replicon: chromosome
- strand: -
- coordinates: 2361126..2364080
- length: 2955
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1801
1861
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1981
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2941ATGCAAGAACATTTGGTGGTTACACTTGATGGAAAAGATTATCTTGTAGAACCAGGTACG
AATTTACTTGAATTTATTAAATCACAAGATACTTTTGTACCTTCAATTTGTTATAACGAG
TCGATGGGACCAATTCAAACATGTGATACATGTACTGTTGAGATTGACGGTAAAATTGAA
CGTTCATGTAGTACGGTGATTGATCGTCCAATGACTGTAAATACTGTGAACAATGATGTG
AAAGATGCTCAAAAAGAAGCGCTTGATCGAATTTTAGAAAAGCATATGCTGTATTGTACA
GTATGTGATTATAATAATGGTGATTGTGAAATTCATAATACGATGGATGCATGGGGGCTT
CAGCATCAAACGTATGAATATAAAGAGAAGCCATACGAAAAAGATTACGGCCCATTTTAT
CGTTATGATCCAAATCAATGTATCTTATGTGGGCGTTGTGTAGAAGCATGTCAAGATATC
GAAGTGAATGAAACTATTAGAATTGATTGGGATCGTGAACATCCACGTGTTATTTGGGAT
AATGATGTACCGATTAATGAGTCTTCATGTGTATCTTGTGGTCAATGTGCGACGGTATGT
CCATGTAATGCCATGATGGAAGTGAATATGGAAGGTAATGCGGGTTATATGACTGATACG
GAACCTGGTTCATTAGCAGCAATGATTGATTTAACTAAAAAAGCAGAACCTGGTTATGGT
CCACTATTTGCAATCTCAGATTCAGAAGCAGAAATGCGTAAAGAGCGTATTAAGAAAACT
AAAACAGTGTGTACTTATTGTGGTGTGGGTTGTTCATTTGAAGTTTGGACTAAAGATAGA
GAAATTTTAAAAGTACAACCATCACATGATTCTCCAGCAAATAAAATTGCGACTTGTGTT
AAAGGTAAGTTTTCATGGGGACATATTAATTCAGATCAACGATTAACTAAACCACTAGTA
AGGAAAAATGGTGAGTTCCATGAAGTAGAATGGGATGAAGCTTTAAACGTCATTGCAGAT
AATTTTACAGCTATTAAAGAAAAGCATGGCCCAGATGCACTATCATTCATTTCTTCTTCT
AAAGCGACGAATGAAGAATCGTATTTAATGCAAAAATTAGCAAGACAAGTTATTGGCACA
AATAACGTTGATAACTGTTCAAGATATTGCCAAGCACCTGCAACAAAAGGCTTATTTAGA
ACGGTTGGACACGGCGGTGACTCAGGTAGTATTGAAGATTTAGAAAAAGCGGCAATGTCT
GTATTGATAGGTACTAATACAGCCGAAGCTCATCCAGTTATCGCATCACGCATGAAACGT
GCACAAAAATTATTTGGTCAAAAAATACATGTATTTGATATTAGAAAACATGAAATGGCA
GAACGTGCGGATCGTTTTTATCAACCTAAACCAGGTACGGATTTAGCGTGGTTAAGTGCA
GTGACTAAGTATATTATTGATCATGATTTACACGATAAAGCATTTATTGATGAGTGGGTA
GATGATTTTGATGAATATTACAAATCATTAGAAACATTTACAATGGCTTTTGCTGAAGAA
GCAACAGGTATTCCTGAATCAGAATTGATTAAATTTGCTGAAGAATGTGCTAAAGCTGAA
TCTGTTGTAATTTGTTGGGCAATGGGTATTACACAACAAGACATTGGTAGTGACTCAAGT
ACAGCGATTTCAAACTTATTATTAGTAACAGGTAATTATCGTCGTCCTGGTACTGGTGCG
TATCCATTACGTGGACATAATAATGTTCAAGGATGTAGTGATATGGGAAGTATGCCTGAT
AAGATTACTGGTTATCAAAGTATTGAAGCGGATGATATTCGCGCTAAATTTGAAAAAGAA
TATGGCGTTAAATTGAATCCAAAAGCTGGTAAAGATAATCATGAAATGGTAGAAGGTATA
CATGACGGAGAAGTACACTCATTGTACTTATATGGTGAAGATACGGGTATTGTGGATTCA
AATATTAATTTTGTACAAGCTGCGTTTGAAAAATTAGATTTCATGGTAGTCCAAGATGAA
TTTTTAACATTCACAGCAACATACGCAGATGTTGTATTGCCAGCAAGTCCTTCACTTGAA
AAAGACGGTACTTTTACAAATACCGAACGTCGTATTCAACGTTTATACCAAGCATTAGAA
CCTCTTGGTGATTCAAAACCTGACTGGAAAATTTTCCAAGCAATTGCTAATAGATTAGGA
TTTGATTGGAATTACAAGCATCCTAGTGAAATTATGGATGAAGTAGCACGCTTAACACCT
CTATATGCTGGGGTAAGTTATGATCGTTTAGAAGGATTCAATAGTTTACAATGGCCAGTA
CAACCTGATGGTACTGATGAGCCTATTCTATACTTAGAAGGATTCAATTTTGATAATGGT
AAAGCAAAATTATTCCCATTATCATTTGATAATTACTTTAAGCAAGATGAAATTTATGAT
ATTCATGTAAACAATGGTCGATTGTTAGAGCACTTCCATGAAGGTAATATGACTTATCAA
ACACCAATGATTAAATACAAAGTGCCACGTGCATTTGTTGAAATTTCTCCAGAGCTTGCT
GAAGATAGAGGCATTCATGAAGGTGCAGAAGTTAAGCTGATTTCTGAAACAGGAGAAGCG
GTATTACAAGTTCACGTGACAGATCGTGTTAAAGGTAAAGAAATCTATATTCCATTAAAT
AATGATGCGATGGAAAATGGAGATCTAGGTGCAATTAACTTATTAACTAATAGTGATGTT
GATCAATACACGGATACACCATCTTATAAACGTACTAGCTGTCGTTTGGAGGTAATTACG
AAACGTGGTAAGTCACCGTTGAACCCTAATAATTTCCGTGTCAATAAAAAACGTCAACCG
CAGTACAGTGTTCAAGTACAGAAAAAATGGGAACGTTCAGATTATGTTTTCCCGGGAAAT
CAGGTGGATAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SACOL_RS12105 [old locus tag: SACOL2301 ]
- symbol: SACOL_RS12105
- description: formate dehydrogenase subunit alpha
- length: 984
- theoretical pI: 4.75761
- theoretical MW: 111243
- GRAVY: -0.523679
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors: Mo-bis(molybdopterin guanine dinucleotide), [2Fe-2S] cluster, [4Fe-4S] cluster
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MQEHLVVTLDGKDYLVEPGTNLLEFIKSQDTFVPSICYNESMGPIQTCDTCTVEIDGKIERSCSTVIDRPMTVNTVNNDVKDAQKEALDRILEKHMLYCTVCDYNNGDCEIHNTMDAWGLQHQTYEYKEKPYEKDYGPFYRYDPNQCILCGRCVEACQDIEVNETIRIDWDREHPRVIWDNDVPINESSCVSCGQCATVCPCNAMMEVNMEGNAGYMTDTEPGSLAAMIDLTKKAEPGYGPLFAISDSEAEMRKERIKKTKTVCTYCGVGCSFEVWTKDREILKVQPSHDSPANKIATCVKGKFSWGHINSDQRLTKPLVRKNGEFHEVEWDEALNVIADNFTAIKEKHGPDALSFISSSKATNEESYLMQKLARQVIGTNNVDNCSRYCQAPATKGLFRTVGHGGDSGSIEDLEKAAMSVLIGTNTAEAHPVIASRMKRAQKLFGQKIHVFDIRKHEMAERADRFYQPKPGTDLAWLSAVTKYIIDHDLHDKAFIDEWVDDFDEYYKSLETFTMAFAEEATGIPESELIKFAEECAKAESVVICWAMGITQQDIGSDSSTAISNLLLVTGNYRRPGTGAYPLRGHNNVQGCSDMGSMPDKITGYQSIEADDIRAKFEKEYGVKLNPKAGKDNHEMVEGIHDGEVHSLYLYGEDTGIVDSNINFVQAAFEKLDFMVVQDEFLTFTATYADVVLPASPSLEKDGTFTNTERRIQRLYQALEPLGDSKPDWKIFQAIANRLGFDWNYKHPSEIMDEVARLTPLYAGVSYDRLEGFNSLQWPVQPDGTDEPILYLEGFNFDNGKAKLFPLSFDNYFKQDEIYDIHVNNGRLLEHFHEGNMTYQTPMIKYKVPRAFVEISPELAEDRGIHEGAEVKLISETGEAVLQVHVTDRVKGKEIYIPLNNDAMENGDLGAINLLTNSDVDQYTDTPSYKRTSCRLEVITKRGKSPLNPNNFRVNKKRQPQYSVQVQKKWERSDYVFPGNQVDK
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: SigB* see SACOL2301
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available